R source

#### Libraries needed

## Bioconductor
library('IRanges')
library('GenomicRanges')
library('GenomeInfoDb')

if(hg19) {
    library('biovizBase')
    library('TxDb.Hsapiens.UCSC.hg19.knownGene')
}

## CRAN
library('ggplot2')
library('grid')
library('gridExtra')
library('knitr')
library('RColorBrewer')
library('mgcv')

R message

## Loading required package: nlme
## 
## Attaching package: 'nlme'
## 
## The following object is masked from 'package:IRanges':
## 
##     collapse
## 
## This is mgcv 1.8-3. For overview type 'help("mgcv-package")'.

R source

## GitHub
library('derfinder')

## Working behind the scenes
# library('knitcitations')
# library('rmarkdown')
# library('knitrBootstrap')

#### Code setup

## For ggplot
tmp <- fullRegions
names(tmp) <- seq_len(length(tmp))
regions.df <- as.data.frame(tmp)
regions.df$width <- width(tmp)
rm(tmp)
nulls.df <- as.data.frame(fullNullSummary)

## Special subsets: need at least 3 points for a density plot
keepChr <- table(regions.df$seqnames) > 2
regions.df.plot <- subset(regions.df, seqnames %in% names(keepChr[keepChr]))

if(hasSig) {
    ## Keep only those sig
    regions.df.sig <- regions.df[idx.sig, ]
    keepChr <- table(regions.df.sig$seqnames) > 2
    regions.df.sig <- subset(regions.df.sig, seqnames %in% names(keepChr[keepChr]))
    
    if(nrow(regions.df.sig) > 0) {
        ## If there's any sig, keep those with finite areas
        if(hasArea) {
            finite.area.sig <- which(is.finite(regions.df.sig$area))
            
            regions.df.sig.area <- regions.df.sig[finite.area.sig, ]
            keepChr <- table(regions.df.sig.area$seqnames) > 2
            regions.df.sig.area <- subset(regions.df.sig.area, seqnames %in%
                names(keepChr[keepChr]))
            
            ## Save the info
            hasArea <- (nrow(regions.df.sig.area) > 0)
        }
    } else {
        hasSig <- hasArea <- FALSE
    }
}

## Get chr lengths
if(hg19) {
    data(hg19Ideogram, package = 'biovizBase')
    seqlengths(fullRegions) <- seqlengths(hg19Ideogram)[mapSeqlevels(names(seqlengths(fullRegions)),
         'UCSC')]
}

## Find which chrs are present in the data set
chrs <- levels(seqnames(fullRegions))

## Subset the fullCoverage data in case that a subset was used
colsubset <- optionsStats$colsubset
if(!is.null(fullCov) & !is.null(colsubset)) {
    fullCov <- lapply(fullCov, function(x) { x[, colsubset] })
}

## Get region coverage for the top regions
if(nBestRegions > 0) {
    if(packageVersion('derfinder') >= '0.0.60') {
        regionCoverage <- getRegionCoverage(fullCov = fullCov, 
            regions = fullRegions[seq_len(nBestRegions)],
            chrsStyle = chrsStyle, species = species,
            currentStyle = currentStyle, verbose = FALSE)
    } else {
        regionCoverage <- getRegionCoverage(fullCov = fullCov, 
            regions = fullRegions[seq_len(nBestRegions)],
            verbose = FALSE)
    }
    
    save(regionCoverage, file=file.path(workingDir, 'regionCoverage.Rdata'))
}

## Graphical setup: transcription database
if(hg19 & is.null(txdb)) {
    txdb <- TxDb.Hsapiens.UCSC.hg19.knownGene
} else {
    stopifnot(!is.null(txdb))
}

R source

p1 <- ggplot(regions.df.plot, aes(x=pvalues, colour=seqnames)) +
    geom_line(stat='density') + xlim(0, 1) +
    labs(title='Density of p-values') + xlab('p-values') +
    scale_colour_discrete(limits=chrs) + theme(legend.title=element_blank())
p1

R source

## Compare the pvalues
summary(fullRegions$pvalues)

R output

##      Min.   1st Qu.    Median      Mean   3rd Qu.      Max. 
## 0.0000002 0.1731000 0.4514000 0.4689000 0.7665000 1.0000000

R source

summary(fullRegions$qvalues)

R output

##     Min.  1st Qu.   Median     Mean  3rd Qu.     Max. 
## 0.002418 0.691300 0.902700 0.800000 1.000000 1.000000

R source

qtable <- lapply(c(1e-04, 0.001, 0.01, 0.025, 0.05, 0.1, 0.2, 0.3, 0.4, 0.5,
    0.6, 0.7, 0.8, 0.9, 1), function(x) {
    data.frame('Cut' = x, 'Count' = sum(fullRegions$qvalues <= x))
})
qtable <- do.call(rbind, qtable)
kable(qtable, format = 'html', align = c('c', 'c'))

Cut	Count
0.0001	0
0.0010	0
0.0100	96
0.0250	162
0.0500	276
0.1000	507
0.2000	1062
0.3000	1451
0.4000	2202
0.5000	2541
0.6000	3408
0.7000	5342
0.8000	7509
0.9000	9973
1.0000	20145

R source

summary(fullRegions$fwer)

R output

##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.0100  1.0000  1.0000  0.9839  1.0000  1.0000

R source

fwertable <- lapply(c(1e-04, 0.001, 0.01, 0.025, 0.05, 0.1, 0.2, 0.3, 0.4, 0.5,
    0.6, 0.7, 0.8, 0.9, 1), function(x) {
    data.frame('Cut' = x, 'Count' = sum(fullRegions$fwer <= x))
})
fwertable <- do.call(rbind, fwertable)
kable(fwertable, format = 'html', align = c('c', 'c'))

Cut	Count
0.0001	0
0.0010	0
0.0100	1
0.0250	1
0.0500	12
0.1000	25
0.2000	58
0.3000	90
0.4000	119
0.5000	236
0.6000	361
0.7000	470
0.8000	559
0.9000	753
1.0000	20145

R source

xrange <- range(log10(regions.df.plot$width))
p2a <- ggplot(regions.df.plot, aes(x=log10(width), colour=seqnames)) + 
    geom_line(stat='density') + labs(title='Density of region lengths') +
    xlab('Region width (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
p2b <- ggplot(regions.df.sig, aes(x=log10(width), colour=seqnames)) +
    geom_line(stat='density') +
    labs(title='Density of region lengths (significant only)') +
    xlab('Region width (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
grid.arrange(p2a, p2b)

R source

xrange <- range(log10(regions.df.plot$area[finite.area]))
if(inf.area > 0) {
    print(paste('Dropping', inf.area, 'due to Inf values.'))
}
p3a <- ggplot(regions.df[finite.area, ], aes(x=log10(area), colour=seqnames)) +
    geom_line(stat='density') + labs(title='Density of region areas') +
    xlab('Region area (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
p3b <- ggplot(regions.df.sig.area, aes(x=log10(area), colour=seqnames)) +
    geom_line(stat='density') +
    labs(title='Density of region areas (significant only)') +
    xlab('Region area (log10)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
grid.arrange(p3a, p3b)

R source

p4 <- ggplot(nulls.df, aes(x=log10(width), colour=chr)) +
    geom_line(stat='density') + labs(title='Density of null region lengths') +
    xlab('Region width (log10)') + scale_colour_discrete(limits=chrs) +
    theme(legend.title=element_blank())
nulls.inf <- !is.finite(nulls.df$area)
if(sum(nulls.inf) > 0) {
    print(paste('Dropping', sum(nulls.inf), 'due to Inf values.'))
}
p5 <- ggplot(nulls.df[!nulls.inf, ], aes(x=log10(area), colour=chr)) +
    geom_line(stat='density') + labs(title='Density of null region areas') +
    xlab('Region area (log10)') + scale_colour_discrete(limits=chrs) +
    theme(legend.title=element_blank())
grid.arrange(p4, p5)

R source

xrange <- range(log2(regions.df.plot$meanCoverage))
p6a <- ggplot(regions.df.plot, aes(x=log2(meanCoverage), colour=seqnames)) +
    geom_line(stat='density') + labs(title='Density of region mean coverage') +
    xlab('Region mean coverage (log2)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
p6b <- ggplot(regions.df.sig, aes(x=log2(meanCoverage), colour=seqnames)) +
    geom_line(stat='density') +
    labs(title='Density of region mean coverage (significant only)') +
    xlab('Region mean coverage (log2)') + scale_colour_discrete(limits=chrs) +
    xlim(xrange) + theme(legend.title=element_blank())
grid.arrange(p6a, p6b)

R source

for(j in grep('log2FoldChange', colnames(values(fullRegions)))) {
    ## Identify the groups
    groups <- strsplit(gsub('log2FoldChange', '',
        colnames(values(fullRegions))[j]), 'vs')[[1]]
    
    ## Calculate the mean coverage only using the 2 groups in question
    j.mean <- which(colnames(values(fullRegions)) %in% paste0('mean', groups))
    groups.n <- sapply(groups, function(x) { sum(optionsStats$groupInfo == x) })
    ma.mean.mat <- as.matrix(values(fullRegions)[, j.mean])
    ## Weighted means
    ma.mean <- drop(ma.mean.mat %*% groups.n) / sum(groups.n) +
        optionsStats$scalefac
    ma.fold2 <- drop(log2(ma.mean.mat + optionsStats$scalefac) %*% c(1, -1))
    
    ma <- data.frame(mean=ma.mean, log2FoldChange=ma.fold2)
    ma2 <- ma[is.finite(ma$log2FoldChange), ]
    fold.mean <- data.frame(foldMean=mean(ma2$log2FoldChange, na.rm=TRUE))
    
    p.ma <- ggplot(ma, aes(x=log2(mean), y=log2FoldChange)) +
        geom_point(size=1.5, alpha=1/5) + 
        ylab("Fold Change [log2(x + sf)]\nRed dashed line at mean; blue line is GAM fit: y ~ s(x, bs = 'cs')") +
        xlab(paste('Mean coverage [log2(x + sf)] using only groups', groups[1], 'and',
            groups[2])) + labs(title=paste('MA style plot:', groups[1], 'vs ', 
            groups[2])) + geom_hline(aes(yintercept=foldMean), data=fold.mean, 
            colour='#990000', linetype='dashed') +
        geom_smooth(aes(y=log2FoldChange, x=log2(mean)), data=subset(ma2,
            mean > 0), method = 'gam', formula = y ~ s(x, bs = 'cs'))
    print(p.ma)
}

R source

plotOverview(regions=fullRegions, type='qval', base_size=overviewParams$base_size, areaRel=overviewParams$areaRel, legend.position=c(0.97, 0.12))

R source

plotOverview(regions=fullRegions, annotation=fullRegions, type='annotation', base_size=overviewParams$base_size, areaRel=overviewParams$areaRel, legend.position=c(0.97, 0.12))

R source

annoReg <- table(fullRegions$region, useNA='always')
annoReg.df <- data.frame(Region=names(annoReg), Count=as.vector(annoReg))
kable(annoReg.df, format = 'html', align=rep('c', 3))

Region	Count
upstream	1387
promoter	341
overlaps 5'	17
inside	13483
overlaps 3'	11
close to 3'	22
downstream	2189
covers	0
NA	2695

R source

plotOverview(regions=fullRegions[idx.sig], annotation=fullRegions[idx.sig], type='annotation', base_size=overviewParams$base_size, areaRel=overviewParams$areaRel, legend.position=c(0.97, 0.12))

R source

if(nBestRegions > 0) {
    plotRegionCoverage(regions = fullRegions, regionCoverage = regionCoverage,
        groupInfo = optionsStats$groupInfo, nearestAnnotation = regions.df,
        annotatedRegions = fullAnnotatedRegions, 
        whichRegions = seq_len(min(nBestRegions, length(fullRegions))),
        colors = NULL, scalefac = optionsStats$scalefac, ask = FALSE, 
        verbose = TRUE, txdb = txdb) 
}

R message

## 2014-11-24 16:54:27 plotRegionCoverage: extracting Tx info
## 2014-11-24 16:54:35 plotRegionCoverage: getting Tx plot info

R source

info <- do.call(rbind, lapply(fullAnnotatedRegions$countTable, function(x) { data.frame(table(x)) }))
colnames(info) <- c('Number of Overlapping States', 'Frequency')
info$State <- gsub('\\..*', '', rownames(info))
rownames(info) <- NULL
kable(info, format = 'html', align=rep('c', 4))

Number of Overlapping States	Frequency	State
0	16206	exon
1	3899	exon
2	40	exon
0	17836	intragenic
1	2309	intragenic
0	18077	intron
1	2000	intron
2	66	intron
3	1	intron
4	1	intron

R source

topArea <- head(regions.df, nBestRegions * 5)
topArea <- data.frame('areaRank'=order(topArea$area, decreasing=TRUE), topArea)
## Clean up -Inf, Inf if present
## More details at https://github.com/ramnathv/rCharts/issues/259
replaceInf <- function(df, colsubset=seq_len(ncol(df))) {
    for(i in colsubset) {
        inf.idx <- !is.finite(df[, i])
        if(any(inf.idx)) {
            inf.sign <- sign(df[inf.idx, i])
            df[inf.idx, i] <- inf.sign * 1e100
        }
    }
    return(df)
}
topArea <- replaceInf(topArea, grep('log2FoldChange|value|area',
    colnames(topArea)))

## Make the table
kable(topArea, format = 'html', table.attr='id="regions_table"')

areaRank	seqnames	start	end	width	strand	value	area	indexStart	indexEnd	cluster	clusterL	meanCoverage	mean0to186	mean186to294	mean294to322	mean322to400	log2FoldChange186to294vs0to186	log2FoldChange294to322vs0to186	log2FoldChange322to400vs0to186	pvalues	significant	qvalues	significantQval	name	annotation	description	region	distance	subregion	insidedistance	exonnumber	nexons	UTR	annoStrand	geneL	codingL	fwer	significantFWER
1	chr1	26752733	26756208	3476		79.51398	276390.597	4578285	4581760	115	4415	4.8777762	0.0697929	0.1279056	0.2846951	19.0287112	8.739284e-01	2.028266e+00	8.090883e+00	0.0000002	TRUE	0.0024182	TRUE	LIN28A	NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963	inside exon	inside	15464	inside exon	0	4	4	overlaps 3'UTR		18950	15566	0.01	TRUE
2	chr8	41119492	41121402	1911		87.95128	168074.896	3330155	3332065	129	3517	2.6681057	0.1735217	0.0528519	0.0211408	10.4249084	-1.715089e+00	-3.037017e+00	5.908775e+00	0.0000006	TRUE	0.0024182	TRUE	SFRP1	NM_003012 NP_003003	inside exon	inside	45588	inside exon	0	3	3	3'UTR		47514	43992	0.03	TRUE
3	chr11	119288701	119290230	1530		77.58648	118707.318	12872515	12874044	381	5197	3.1359477	0.2879739	0.2121569	0.1452288	11.8984314	-4.408065e-01	-9.876107e-01	5.368690e+00	0.0000012	TRUE	0.0024182	TRUE	THY1	NM_006288 NP_006279	inside exon	inside	4016	inside exon	0	4	4	overlaps 3'UTR		5591	1497	0.04	TRUE
4	chr5	146770385	146772376	1992		59.48379	118491.706	12805081	12807072	394	10875	1.9074046	0.3864458	0.2535141	0.1276104	6.8620482	-6.082003e-01	-1.598520e+00	4.150301e+00	0.0000012	TRUE	0.0024182	TRUE	DPYSL3	NM_001197294 NM_001387 NP_001184223 NP_001378	inside exon	inside	117243	inside exon	0	14	14	3'UTR		119248	115823	0.04	TRUE
5	chr6	121767978	121769318	1341		72.01807	96576.237	11635359	11636699	325	2859	2.8424683	0.4359433	0.5225951	0.2334079	10.1779269	2.615529e-01	-9.012872e-01	4.545159e+00	0.0000015	TRUE	0.0024182	TRUE	GJA1	NM_000165 NP_000156	inside exon	inside	11233	inside exon	0	2	2	overlaps 3'UTR		14128	1148	0.05	FALSE
6	chr3	181430237	181431387	1151		77.21343	88872.661	16396498	16397648	513	2487	2.5397046	0.1052997	0.0000000	0.2807993	9.7727194	-1.000000e+100	1.415037e+00	6.536186e+00	0.0000019	TRUE	0.0024182	TRUE	SOX2	NM_003106 NP_003097	inside exon	inside	525	inside exon	0	1	1	overlaps 3'UTR		2511	953	0.05	FALSE
7	chr1	156639292	156640300	1009		86.83235	87613.840	19868677	19869685	536	8487	1.4092170	0.3002973	0.0000000	0.0000000	5.3365709	-1.000000e+100	-1.000000e+100	4.151450e+00	0.0000019	TRUE	0.0024182	TRUE	NES	NM_006617 NP_006608	inside exon	inside	6889	inside exon	0	4	4	inside transcription region		8633	7942	0.05	FALSE
8	chr17	47131156	47132322	1167		73.50336	85778.421	9735800	9736966	231	18864	1.0700943	0.0000000	0.0000000	0.0000000	4.2803770	NaN	NaN	1.000000e+100	0.0000019	TRUE	0.0024182	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	56382	inside exon	0	13	13	3'UTR		58733	51698	0.05	FALSE
9	chr3	46623010	46623949	940		91.12368	85656.263	5014344	5015283	116	4837	2.3481915	0.0000000	0.0000000	0.0000000	9.3927660	NaN	NaN	1.000000e+100	0.0000019	TRUE	0.0024182	TRUE	TDGF1	NM_001174136 NM_003212 NP_001167607 NP_003203	inside exon	inside	3934	inside exon	0	6	6	3'UTR		4876	3280	0.05	FALSE
10	chr4	88852568	88853551	984		84.47945	83127.783	6772611	6773594	233	15558	1.0010163	0.0000000	0.0000000	0.0000000	4.0040650	NaN	NaN	1.000000e+100	0.0000019	TRUE	0.0024182	TRUE	SPP1	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759	upstream	upstream	43251	NA	NA	NA	7	NA		7761	6000	0.05	FALSE
11	chr13	51749186	51750194	1009		82.11605	82855.098	3598908	3599916	92	10662	3.4682854	0.0000000	0.0000000	0.0000000	13.8731417	NaN	NaN	1.000000e+100	0.0000020	TRUE	0.0024182	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.05	FALSE
12	chr14	74825669	74826706	1038		76.47094	79376.834	6617553	6618590	201	3221	1.0861753	0.0000000	0.0000000	0.0000000	4.3447013	NaN	NaN	1.000000e+100	0.0000020	TRUE	0.0024182	TRUE	VRTN	NM_018228 NP_060698	inside exon	inside	10503	inside exon	0	2	2	3'UTR		11545	2108	0.05	FALSE
13	chr6	121769324	121770282	959		79.73529	76466.143	11636704	11637662	325	2859	4.2765902	0.4027112	0.2573514	0.7966632	15.6496350	-6.460058e-01	9.842245e-01	5.280240e+00	0.0000024	TRUE	0.0024182	TRUE	GJA1	NM_000165 NP_000156	inside exon	inside	12579	inside exon	0	2	2	3'UTR		14128	1148	0.06	FALSE
14	chr2	241653373	241654359	987		77.21894	76215.091	23640292	23641278	634	13166	1.2658561	0.0435664	0.0000000	0.0000000	5.0198582	-1.000000e+100	-1.000000e+100	6.848288e+00	0.0000024	TRUE	0.0024182	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	105366	inside exon	0	49	49	3'UTR		106544	80388	0.06	FALSE
15	chrX	91355122	91355987	866		85.19922	73782.524	5968604	5969469	243	5561	3.1404157	0.0808314	0.0004619	0.0198614	12.4605081	-7.451211e+00	-2.024946e+00	7.268231e+00	0.0000024	TRUE	0.0024182	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	264662	inside intron	100387	3	7	inside transcription region		787768	632811	0.06	FALSE
16	chr8	41121658	41122662	1005		72.05638	72416.664	3332321	3333325	129	3517	1.5849751	0.2612935	0.1681592	0.0000000	5.9104478	-6.358437e-01	-1.000000e+100	4.499524e+00	0.0000025	TRUE	0.0024182	TRUE	SFRP1	NM_003012 NP_003003	inside exon	inside	44328	inside exon	0	3	3	3'UTR		47514	43992	0.06	FALSE
17	chr4	154701763	154702907	1145		62.77889	71881.833	11398405	11399549	423	1145	5.5295197	0.3785153	0.5287336	0.5998253	20.6110044	4.821895e-01	6.641909e-01	5.766919e+00	0.0000025	TRUE	0.0024182	TRUE	SFRP2	NM_003013 NP_003004	inside exon	inside	7321	inside exon	0	3	3	overlaps 3'UTR		8486	7384	0.06	FALSE
18	chr7	121701134	121702031	898		76.71994	68894.502	12251034	12251931	334	3203	1.4444321	0.0000000	0.0000000	0.0000000	5.7777283	NaN	NaN	1.000000e+100	0.0000025	TRUE	0.0024182	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside exon	inside	187975	inside exon	0	30	30	overlaps 3'UTR		188931	187720	0.06	FALSE
19	chr3	54666156	54666863	708		91.78333	64982.599	7090615	7091322	171	7351	2.8867232	0.0000000	0.0000000	0.0000000	11.5468927	NaN	NaN	1.000000e+100	0.0000027	TRUE	0.0024182	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.06	FALSE
20	chr17	47129292	47130155	864		73.29115	63323.553	9734055	9734918	231	18864	0.9523727	0.0467593	0.0000000	0.0000000	3.7627315	-1.000000e+100	-1.000000e+100	6.330385e+00	0.0000028	TRUE	0.0024182	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	54518	inside exon	0	13	13	3'UTR		58733	51698	0.06	FALSE
21	chr4	180088184	180089122	939		66.96376	62878.974	12307600	12308538	468	3689	3.8029286	0.3011715	0.3669862	0.4517572	14.0917998	2.851406e-01	5.849625e-01	5.548127e+00	0.0000030	TRUE	0.0024182	TRUE	LINC01098	NM_001085490 NR_028342	NA	NA	0	NA	NA	NA	6	NA		0	0	0.06	FALSE
22	chr13	100638293	100639019	727		84.29721	61284.073	5450930	5451656	193	5501	1.8143741	0.0000000	0.0000000	0.0555708	7.2019257	NaN	1.000000e+100	1.000000e+100	0.0000030	TRUE	0.0024182	TRUE	ZIC2	NM_007129 NP_009060	inside exon	inside	4267	inside exon	0	3	3	3'UTR		4993	3617	0.06	FALSE
23	chr2	241655024	241655866	843		72.26168	60916.595	23641882	23642724	634	13166	1.2413998	0.0000000	0.0000000	0.0000000	4.9655991	NaN	NaN	1.000000e+100	0.0000030	TRUE	0.0024182	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	103859	inside exon	0	49	49	3'UTR		106544	80388	0.06	FALSE
24	chrX	91359597	91360452	856		70.66158	60486.309	5972735	5973590	243	5561	1.2372664	0.0000000	0.0007009	0.0000000	4.9483645	1.000000e+100	NaN	1.000000e+100	0.0000030	TRUE	0.0024182	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	269137	inside intron	95922	3	7	inside transcription region		787768	632811	0.06	FALSE
25	chr16	3065360	3066043	684		86.94394	59469.653	1016030	1016713	34	3462	4.2547515	0.1181287	0.1640351	0.0295322	16.7073099	4.736455e-01	-2.000000e+00	7.143977e+00	0.0000030	TRUE	0.0024182	TRUE	CLDN6	NM_021195 NP_067018	inside exon	inside	2145	inside exon	0	2	2	overlaps 5' UTR		3475	662	0.06	FALSE
26	chr17	47127878	47128536	659		81.24108	53537.874	9733135	9733793	231	18864	0.7050076	0.0000000	0.0000000	0.0000000	2.8200303	NaN	NaN	1.000000e+100	0.0000048	TRUE	0.0033120	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	53104	inside exon	0	13	13	3'UTR		58733	51698	0.11	FALSE
27	chr16	3064714	3065348	635		82.75103	52546.906	1015384	1016018	34	3462	3.5320472	0.0000000	0.0000000	0.0000000	14.1281890	NaN	NaN	1.000000e+100	0.0000051	TRUE	0.0033120	TRUE	CLDN6	NM_021195 NP_067018	inside exon	inside	2840	inside exon	0	2	2	3'UTR		3475	662	0.11	FALSE
28	chr4	79637144	79637240	97		538.39311	52224.132	5869245	5869341	208	1740	0.4500000	0.0000000	0.0000000	0.0000000	1.8000000	NaN	NaN	1.000000e+100	0.0000051	TRUE	0.0033120	TRUE	LINC01094	NR_038303 NR_038304 NR_038305 NR_038306 NR_038307 NR_038308	NA	NA	0	NA	NA	NA	5	NA		0	0	0.11	FALSE
29	chr1	223198626	223199262	637		79.44571	50606.916	26367323	26367959	754	8216	1.4865777	0.0000000	0.0681319	0.0028257	5.8753532	1.000000e+100	1.000000e+100	1.000000e+100	0.0000056	TRUE	0.0033120	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	210195	NA	NA	NA	10	NA		190906	63148	0.12	FALSE
30	chr1	223199880	223200539	660		76.59289	50551.310	26368088	26368747	754	8216	1.7748485	0.3657576	0.5766667	0.1530303	6.0039394	6.568499e-01	-1.257070e+00	4.036950e+00	0.0000056	TRUE	0.0033120	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	211449	NA	NA	NA	10	NA		190906	63148	0.12	FALSE
31	chr6	114745695	114746541	847		59.39083	50304.036	11097112	11097958	302	5708	2.1714286	0.2817001	0.5584416	0.3397875	7.5057851	9.872461e-01	2.704725e-01	4.735771e+00	0.0000056	TRUE	0.0033120	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	82155	NA	NA	NA	5	NA		286790	5588	0.12	FALSE
32	chr6	114744941	114745647	707		70.27914	49687.350	11096383	11097089	302	5708	2.1809760	0.0571429	0.1142857	0.0000000	8.5524752	1.000000e+00	-1.000000e+100	7.225625e+00	0.0000058	TRUE	0.0033120	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	81401	NA	NA	NA	5	NA		286790	5588	0.13	FALSE
33	chrX	91357652	91358393	742		66.78027	49550.959	5970991	5971732	243	5561	0.8698787	0.0000000	0.0000000	0.0215633	3.4579515	NaN	1.000000e+100	1.000000e+100	0.0000058	TRUE	0.0033120	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	267192	inside intron	97981	3	7	inside transcription region		787768	632811	0.13	FALSE
34	chr6	121770288	121770836	549		89.76355	49280.187	11637668	11638216	325	2859	7.2091075	0.4346084	0.1428051	0.8382514	27.4207650	-1.605668e+00	9.476669e-01	5.979409e+00	0.0000059	TRUE	0.0033120	TRUE	GJA1	NM_000165 NP_000156	inside exon	inside	13543	inside exon	0	2	2	3'UTR		14128	1148	0.13	FALSE
35	chr21	44473331	44474093	763		64.42285	49154.637	2429142	2429904	56	13860	4.4161861	0.5698558	0.7216252	0.4773263	15.8959371	3.406527e-01	-2.556210e-01	4.801917e+00	0.0000061	TRUE	0.0033120	TRUE	CBS	NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120	overlaps two exons	inside	22379	overlaps two exons	0	18	18	overlaps 3'UTR		23171	18313	0.13	FALSE
36	chr3	32937639	32938161	523		93.94208	49131.707	3398644	3399166	82	7451	1.3167304	0.0772467	0.2260038	0.0772467	4.8864245	1.548803e+00	0.000000e+00	5.983163e+00	0.0000061	TRUE	0.0033120	TRUE	TRIM71	NM_001039111 NP_001034200	downstream	downstream	78129	NA	NA	NA	4	NA		74261	73730	0.13	FALSE
37	chr4	154709486	154710211	726		67.27886	48844.451	11400187	11400912	424	3196	3.8529614	0.3614325	0.2953168	0.6955923	14.0595041	-2.914628e-01	9.445157e-01	5.281676e+00	0.0000061	TRUE	0.0033120	TRUE	SFRP2	NM_003013 NP_003004	inside exon	inside	17	inside exon	0	1	3	overlaps 5' UTR		8486	7384	0.13	FALSE
38	chr17	47132578	47133188	611		75.05311	45857.449	9737063	9737673	231	18864	1.3646481	0.0000000	0.0000000	0.0000000	5.4585925	NaN	NaN	1.000000e+100	0.0000074	TRUE	0.0038991	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	57804	inside exon	0	13	13	3'UTR		58733	51698	0.14	FALSE
39	chr12	66358871	66359574	704		64.08708	45117.303	8151553	8152256	215	2964	1.3661222	0.1147727	0.2295455	0.1127841	5.0073864	1.000000e+00	-2.521630e-02	5.447206e+00	0.0000077	TRUE	0.0038991	TRUE	HMGA2	NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958	inside exon	inside	140631	inside exon	0	5	5	3'UTR		141831	138021	0.14	FALSE
40	chr13	43439807	43440537	731		60.07805	43917.055	2379953	2380683	57	13438	0.7550616	0.0484268	0.0276334	0.0259918	2.9181943	-8.093941e-01	-8.977499e-01	5.913126e+00	0.0000080	TRUE	0.0038991	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	125870	NA	NA	NA	13	NA		105883	103915	0.14	FALSE
41	chr13	56152175	56152866	692		62.81466	43467.747	3924107	3924798	121	13379	0.9393064	0.0000000	0.0291908	0.0291908	3.6988439	1.000000e+100	1.000000e+100	1.000000e+100	0.0000082	TRUE	0.0038991	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.14	FALSE
42	chr12	66357288	66358026	739		58.19693	43007.531	8150015	8150753	215	2964	1.1100812	0.2159675	0.1093369	0.0546685	4.0603518	-9.820335e-01	-1.982034e+00	4.232718e+00	0.0000082	TRUE	0.0038991	TRUE	HMGA2	NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958	inside exon	inside	139048	inside exon	0	5	5	3'UTR		141831	138021	0.14	FALSE
43	chr2	77326330	77326911	582		72.88709	42420.286	8971477	8972058	213	11162	1.0189003	0.0000000	0.0000000	0.0000000	4.0756014	NaN	NaN	1.000000e+100	0.0000085	TRUE	0.0038991	TRUE	LRRTM4	NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269	inside intron	inside	422591	inside intron	350288	4	4	inside transcription region		774652	772976	0.14	FALSE
44	chr17	47130651	47131149	499		84.31263	42072.000	9735301	9735799	231	18864	1.3081162	0.0404810	0.0000000	0.0000000	5.1919840	-1.000000e+100	-1.000000e+100	7.002898e+00	0.0000085	TRUE	0.0038991	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	55877	inside exon	0	13	13	3'UTR		58733	51698	0.14	FALSE
45	chr5	141690136	141690841	706		56.93979	40199.495	12323735	12324440	384	14439	0.9403683	0.0858357	0.0000000	0.0000000	3.6756374	-1.000000e+100	-1.000000e+100	5.420273e+00	0.0000095	TRUE	0.0042482	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	13779	inside exon	0	3	3	3'UTR		14628	5556	0.15	FALSE
46	chr3	54672858	54673506	649		61.42271	39863.336	7096453	7097101	171	7351	2.5134823	0.0126348	0.1531587	0.1839753	9.7041602	3.599550e+00	3.864035e+00	9.585054e+00	0.0000098	TRUE	0.0042979	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.15	FALSE
47	chr8	41166135	41166594	460		83.40009	38364.041	3333665	3334124	132	645	0.8604348	0.1756522	0.0000000	0.0000000	3.2660870	-1.000000e+100	-1.000000e+100	4.216770e+00	0.0000113	TRUE	0.0047505	TRUE	SFRP1	NM_003012 NP_003003	inside exon	inside	396	inside exon	0	1	3	inside transcription region		47514	43992	0.16	FALSE
48	chr14	74824318	74824928	611		62.38688	38118.382	6616508	6617118	201	3221	0.8617840	0.0000000	0.0000000	0.0000000	3.4471358	NaN	NaN	1.000000e+100	0.0000114	TRUE	0.0047505	TRUE	VRTN	NM_018228 NP_060698	inside exon	inside	9152	inside exon	0	2	2	inside transcription region		11545	2108	0.16	FALSE
49	chr3	109048421	109049064	644		58.04171	37378.859	10144324	10144967	311	11345	1.1377329	0.1524845	0.1704969	0.1121118	4.1158385	1.610831e-01	-4.437242e-01	4.754452e+00	0.0000118	TRUE	0.0047505	TRUE	DPPA4	NM_018189 NP_060659	inside intron	inside	7355	inside intron	493	5	6	inside transcription region		11431	8594	0.16	FALSE
50	chr2	67566463	67567059	597		62.44863	37281.832	7345013	7345609	170	8050	0.8389447	0.0000000	0.0000000	0.0000000	3.3557789	NaN	NaN	1.000000e+100	0.0000121	TRUE	0.0047505	TRUE	ETAA1	NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435	upstream	upstream	57383	NA	NA	NA	6	NA		13091	12589	0.16	FALSE
51	chr13	56148912	56149439	528		70.13353	37030.504	3921469	3921996	121	13379	1.1949811	0.0000000	0.0000000	0.0000000	4.7799242	NaN	NaN	1.000000e+100	0.0000122	TRUE	0.0047505	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.16	FALSE
52	chrX	91356934	91357441	508		72.62517	36893.584	5970397	5970904	243	5561	0.9522638	0.0000000	0.0000000	0.0000000	3.8090551	NaN	NaN	1.000000e+100	0.0000124	TRUE	0.0047505	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	266474	inside intron	98933	3	7	inside transcription region		787768	632811	0.16	FALSE
53	chr13	51746403	51746853	451		81.62126	36811.190	3596182	3596632	92	10662	1.7410200	0.0110865	0.0895787	0.0000000	6.8634146	3.014355e+00	-1.000000e+100	9.273982e+00	0.0000127	TRUE	0.0047505	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.16	FALSE
54	chr6	114743647	114744115	469		77.90835	36539.014	11095102	11095570	302	5708	6.9364606	0.2443497	1.1053305	0.3876333	26.0085288	2.177459e+00	6.657452e-01	6.733894e+00	0.0000127	TRUE	0.0047505	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	80107	NA	NA	NA	5	NA		286790	5588	0.16	FALSE
55	chrX	91358915	91359495	581		61.80140	35906.611	5972053	5972633	243	5561	1.0418244	0.0000000	0.0117040	0.0000000	4.1555938	1.000000e+100	NaN	1.000000e+100	0.0000135	TRUE	0.0049612	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	268455	inside intron	96879	3	7	inside transcription region		787768	632811	0.17	FALSE
56	chr19	45411790	45412262	473		74.22039	35106.247	9396803	9397275	286	3581	3.5921776	0.4579281	0.3302326	0.4046512	13.1758985	-4.716388e-01	-1.784424e-01	4.846636e+00	0.0000148	TRUE	0.0053394	TRUE	APOE	NM_000041 NP_000032 XM_005258867 XP_005258924	inside exon	inside	2751	inside exon	0	4	4	inside transcription region		3611	2625	0.19	FALSE
57	chr4	41270004	41270441	438		78.55461	34406.920	3753829	3754266	117	11482	9.1081050	1.9310502	1.1945205	0.2452055	33.0616438	-6.929540e-01	-2.977323e+00	4.097701e+00	0.0000153	TRUE	0.0054177	TRUE	UCHL1	NM_004181 NP_004172	inside exon	inside	11106	inside exon	0	8	8	overlaps 3'UTR		11548	7357	0.19	FALSE
58	chr3	181431436	181431922	487		68.44358	33332.023	16397679	16398165	513	2487	1.7767967	0.0000000	0.0000000	0.2106776	6.8965092	NaN	1.000000e+100	1.000000e+100	0.0000165	TRUE	0.0054552	TRUE	SOX2	NM_003106 NP_003097	inside exon	inside	1724	inside exon	0	1	1	3'UTR		2511	953	0.20	FALSE
59	chr15	65619625	65620146	522		63.55412	33175.251	5963610	5964131	184	8664	0.6612069	0.0000000	0.0773946	0.0000000	2.5674330	1.000000e+100	NaN	1.000000e+100	0.0000168	TRUE	0.0054552	TRUE	IGDCC3	NM_004884 NP_004875	inside exon	inside	50232	inside exon	0	14	14	3'UTR		50913	48879	0.21	FALSE
60	chr2	77325816	77326288	473		69.39551	32824.077	8970981	8971453	213	11162	0.8267442	0.0000000	0.0000000	0.0000000	3.3069767	NaN	NaN	1.000000e+100	0.0000168	TRUE	0.0054552	TRUE	LRRTM4	NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269	inside intron	inside	423214	inside intron	349774	4	4	inside transcription region		774652	772976	0.21	FALSE
61	chr21	24734077	24734561	485		67.64219	32806.461	325119	325603	19	2439	0.6385567	0.0000000	0.0000000	0.0000000	2.5542268	NaN	NaN	1.000000e+100	0.0000168	TRUE	0.0054552	TRUE	D21S2088E	NR_040254	NA	NA	0	NA	NA	NA	5	NA		0	0	0.21	FALSE
62	chr13	100634699	100635393	695		47.18415	32792.984	5449544	5450238	193	5501	1.2333094	0.0581295	0.0000000	0.0000000	4.8751079	-1.000000e+100	-1.000000e+100	6.390020e+00	0.0000168	TRUE	0.0054552	TRUE	ZIC2	NM_007129 NP_009060	inside exon	inside	673	inside exon	0	1	3	inside transcription region		4993	3617	0.21	FALSE
63	chr13	51744861	51745332	472		68.98421	32560.548	3594902	3595373	92	10662	0.5984110	0.0296610	0.0000000	0.0000000	2.3639831	-1.000000e+100	-1.000000e+100	6.316508e+00	0.0000176	TRUE	0.0055400	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.21	FALSE
64	chr6	132240713	132241139	427		75.96594	32437.456	12339917	12340343	349	3398	0.5853630	0.0000000	0.0000000	0.0000000	2.3414520	NaN	NaN	1.000000e+100	0.0000176	TRUE	0.0055400	TRUE	ENPP1	NM_006208 NP_006199 XM_005267017 XP_005267074	downstream	downstream	111557	NA	NA	NA	25	NA		87139	82475	0.21	FALSE
65	chr4	180089245	180089661	417		75.93957	31666.803	12308539	12308955	468	3689	1.2370504	0.0000000	0.0000000	0.0000000	4.9482014	NaN	NaN	1.000000e+100	0.0000195	TRUE	0.0058388	TRUE	LINC01098	NM_001085490 NR_028342	NA	NA	0	NA	NA	NA	6	NA		0	0	0.22	FALSE
66	chrX	91356437	91356913	477		66.17958	31567.659	5969919	5970395	243	5561	1.4183438	0.0000000	0.0000000	0.0000000	5.6733753	NaN	NaN	1.000000e+100	0.0000197	TRUE	0.0058388	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	265977	inside intron	99461	3	7	inside transcription region		787768	632811	0.22	FALSE
67	chr6	114744120	114744644	525		59.73328	31359.973	11095575	11096099	302	5708	2.7027619	0.1154286	0.1859048	0.1539048	10.3558095	6.875634e-01	4.150375e-01	6.487296e+00	0.0000197	TRUE	0.0058388	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	80580	NA	NA	NA	5	NA		286790	5588	0.22	FALSE
68	chr13	51747951	51748271	321		97.26020	31220.525	3597688	3598008	92	10662	2.9612150	0.0342679	0.0542056	0.0000000	11.7563863	6.615838e-01	-1.000000e+100	8.422371e+00	0.0000197	TRUE	0.0058388	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.22	FALSE
69	chr6	31137993	31138419	427		72.61842	31008.067	3620462	3620888	81	1547	9.3961358	0.0730679	0.7199063	0.3353630	36.4562061	3.300499e+00	2.198414e+00	8.962711e+00	0.0000204	TRUE	0.0059437	TRUE	POU5F1	NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034	inside exon	inside	32	inside exon	0	1	5	overlaps 5' UTR		6337	6019	0.22	FALSE
70	chr6	3224547	3225079	533		58.00959	30919.112	464184	464716	12	3330	7.9213884	2.6101313	1.8840525	1.2243902	25.9669794	-4.702832e-01	-1.092059e+00	3.314484e+00	0.0000208	TRUE	0.0059603	TRUE	TUBB2B	NM_178012 NP_821080	inside exon	inside	2889	inside exon	0	4	4	overlaps 3'UTR		3473	2792	0.22	FALSE
71	chr1	156642094	156642564	471		65.51656	30858.301	19871080	19871550	536	8487	0.7092357	0.0428875	0.0000000	0.0000000	2.7940552	-1.000000e+100	-1.000000e+100	6.025660e+00	0.0000210	TRUE	0.0059603	TRUE	NES	NM_006617 NP_006608	inside exon	inside	4625	inside exon	0	4	4	inside transcription region		8633	7942	0.22	FALSE
72	chr10	53793590	53794057	468		64.76130	30308.289	5589015	5589482	138	5761	2.4260684	0.0863248	0.0863248	0.0000000	9.5316239	0.000000e+00	-1.000000e+100	6.786803e+00	0.0000221	TRUE	0.0061104	TRUE	PRKG1	NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029	inside intron	inside	959356	inside intron	20187	6	18	inside transcription region		1223876	1219309	0.23	FALSE
73	chr3	46622622	46622994	373		81.24420	30304.086	5013971	5014343	116	4837	2.2241287	0.0000000	0.0000000	0.0000000	8.8965147	NaN	NaN	1.000000e+100	0.0000221	TRUE	0.0061104	TRUE	TDGF1	NM_001174136 NM_003212 NP_001167607 NP_003203	inside exon	inside	3546	inside exon	0	6	6	overlaps 3'UTR		4876	3280	0.23	FALSE
74	chr4	93361855	93361950	96		313.08401	30056.065	7116442	7116537	250	6141	0.6572917	0.0000000	0.0000000	0.0000000	2.6291667	NaN	NaN	1.000000e+100	0.0000238	TRUE	0.0063471	TRUE	GRID2	NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258	inside intron	inside	136305	inside intron	-135960	1	15	inside transcription region		1468099	1467841	0.23	FALSE
75	chr13	51744366	51744682	317		94.75880	30038.539	3594552	3594868	92	10662	1.0873817	0.0000000	0.0000000	0.0000000	4.3495268	NaN	NaN	1.000000e+100	0.0000239	TRUE	0.0063471	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.23	FALSE
76	chr1	156638790	156639287	498		59.98427	29872.168	19868175	19868672	536	8487	1.4372490	0.6622490	0.2433735	0.0000000	4.8433735	-1.444202e+00	-1.000000e+100	2.870567e+00	0.0000246	TRUE	0.0063471	TRUE	NES	NM_006617 NP_006608	inside exon	inside	7902	inside exon	0	4	4	overlaps 3'UTR		8633	7942	0.23	FALSE
77	chr16	3140235	3140562	328		90.96302	29835.870	1054851	1055178	35	10352	0.8522866	0.0000000	0.0829268	0.0615854	3.2646341	1.000000e+100	1.000000e+100	1.000000e+100	0.0000246	TRUE	0.0063471	TRUE	ZSCAN10	NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194	inside exon	inside	8731	inside exon	0	5	5	overlaps 5' UTR		10398	1160	0.23	FALSE
78	chr13	53277405	53277933	529		56.30227	29783.903	3907679	3908207	103	529	1.4676749	0.0355388	0.0007561	0.0211720	5.8132325	-5.554589e+00	-7.472339e-01	7.353804e+00	0.0000246	TRUE	0.0063471	TRUE	LECT1	NM_001011705 NM_007015 NP_001011705 NP_008946 XM_006719760 XM_006719761 XP_006719823 XP_006719824	inside exon	inside	36014	inside exon	0	6	6	overlaps 3'UTR		36547	36187	0.23	FALSE
79	chr20	38901726	38902118	393		75.09322	29511.636	4403076	4403468	116	5560	1.2376590	0.0000000	0.0513995	0.1027990	4.7964377	1.000000e+100	1.000000e+100	1.000000e+100	0.0000252	TRUE	0.0064323	TRUE	MAFB	NM_005461 NP_005452	downstream	downstream	415758	NA	NA	NA	1	NA		3359	971	0.23	FALSE
80	chr2	1636024	1636547	524		55.88506	29283.774	68785	69308	2	3615	1.8604962	1.4286260	0.0770992	0.1541985	5.7820611	-4.211768e+00	-3.211768e+00	2.016956e+00	0.0000260	TRUE	0.0065561	TRUE	PXDN	NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959	inside exon	inside	111744	inside exon	0	23	23	3'UTR		112632	110251	0.24	FALSE
81	chr3	32938593	32939100	508		57.19795	29056.558	3399513	3400020	82	7451	2.8214567	0.3248031	0.8153543	0.8303150	9.3153543	1.327862e+00	1.354093e+00	4.841973e+00	0.0000280	TRUE	0.0069593	TRUE	TRIM71	NM_001039111 NP_001034200	downstream	downstream	79083	NA	NA	NA	4	NA		74261	73730	0.25	FALSE
82	chr6	114746581	114747109	529		54.60260	28884.773	11097998	11098526	302	5708	1.2026465	0.0000000	0.0015123	0.0056711	4.8034026	1.000000e+100	1.000000e+100	1.000000e+100	0.0000288	TRUE	0.0070278	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	83041	NA	NA	NA	5	NA		286790	5588	0.26	FALSE
83	chr4	88855096	88855451	356		81.03391	28848.073	6773873	6774228	233	15558	0.7375000	0.0000000	0.0000000	0.0000000	2.9500000	NaN	NaN	1.000000e+100	0.0000290	TRUE	0.0070278	TRUE	SPP1	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759	upstream	upstream	41351	NA	NA	NA	7	NA		7761	6000	0.26	FALSE
84	chr2	67564680	67565017	338		84.98693	28725.581	7344267	7344604	170	8050	0.7118343	0.0000000	0.0000000	0.0000000	2.8473373	NaN	NaN	1.000000e+100	0.0000296	TRUE	0.0070866	TRUE	ETAA1	NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435	upstream	upstream	59425	NA	NA	NA	6	NA		13091	12589	0.26	FALSE
85	chr15	29992934	29993100	167		171.40441	28624.536	678020	678186	27	5499	0.8221557	0.0023952	0.0000000	0.0000000	3.2862275	-1.000000e+100	-1.000000e+100	1.042206e+01	0.0000299	TRUE	0.0070866	TRUE	TJP1	NM_003257 NM_175610 NP_003248 NP_783297 XM_005254616 XM_005254617 XM_005254618 XM_005254619 XM_005254620 XM_005254621 XM_006720660 XM_006720661 XM_006725553 XM_006725554 XM_006725555 XM_006725556 XM_006725557 XM_006725558 XM_006725559 XM_006725560 XP_005254673 XP_005254674 XP_005254675 XP_005254676 XP_005254677 XP_005254678 XP_006720723 XP_006720724 XP_006725616 XP_006725617 XP_006725618 XP_006725619 XP_006725620 XP_006725621 XP_006725622 XP_006725623	inside exon	inside	121606	inside exon	0	27	27	3'UTR		122349	120432	0.26	FALSE
86	chr17	41605388	41605870	483		59.07014	28530.878	7969729	7970211	193	6721	1.3430642	0.3345756	0.2927536	0.0418219	4.7031056	-1.926451e-01	-3.000000e+00	3.813210e+00	0.0000303	TRUE	0.0070866	TRUE	ETV4	NM_001079675 NM_001261437 NM_001261438 NM_001261439 NM_001986 NP_001073143 NP_001248366 NP_001248367 NP_001248368 NP_001977	inside exon	inside	17930	inside exon	0	12	12	3'UTR		18589	16791	0.26	FALSE
87	chr4	180089763	180090165	403		68.29027	27520.979	12309057	12309459	468	3689	0.8524814	0.0000000	0.0000000	0.0000000	3.4099256	NaN	NaN	1.000000e+100	0.0000341	TRUE	0.0079067	TRUE	LINC01098	NM_001085490 NR_028342	NA	NA	0	NA	NA	NA	6	NA		0	0	0.29	FALSE
88	chr3	181429729	181430064	336		80.48491	27042.929	16396162	16396497	513	2487	1.2839286	0.0000000	0.0726190	0.0000000	5.0630952	1.000000e+100	NaN	1.000000e+100	0.0000359	TRUE	0.0080788	TRUE	SOX2	NM_003106 NP_003097	inside exon	inside	17	inside exon	0	1	1	5' UTR		2511	953	0.30	FALSE
89	chr3	54667420	54667767	348		77.62833	27014.657	7091866	7092213	171	7351	2.3274425	0.0000000	0.0000000	0.0000000	9.3097701	NaN	NaN	1.000000e+100	0.0000359	TRUE	0.0080788	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.30	FALSE
90	chr4	93174072	93174396	325		82.82230	26917.247	7112874	7113198	248	10998	0.8833846	0.0000000	0.0000000	0.0000000	3.5335385	NaN	NaN	1.000000e+100	0.0000361	TRUE	0.0080788	TRUE	GRID2	NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258	upstream	upstream	51154	NA	NA	NA	6	NA		912868	912269	0.30	FALSE
91	chr13	43442075	43442357	283		93.63735	26499.371	2381629	2381911	57	13438	0.9687279	0.0275618	0.0374558	0.0049470	3.8049470	4.425182e-01	-2.478047e+00	7.109061e+00	0.0000401	TRUE	0.0088267	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	124050	NA	NA	NA	13	NA		105883	103915	0.32	FALSE
92	chr17	47126876	47127312	437		60.28434	26344.256	9732400	9732836	231	18864	1.0913043	0.0000000	0.0000000	0.0000000	4.3652174	NaN	NaN	1.000000e+100	0.0000403	TRUE	0.0088267	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	52102	inside exon	0	13	13	3'UTR		58733	51698	0.32	FALSE
93	chr14	74823666	74824084	419		62.27434	26092.950	6616049	6616467	201	3221	1.0640811	0.0763723	0.0964200	0.0000000	4.0835322	3.362834e-01	-1.000000e+100	5.740624e+00	0.0000413	TRUE	0.0089426	TRUE	VRTN	NM_018228 NP_060698	inside exon	inside	8500	inside exon	0	2	2	inside transcription region		11545	2108	0.32	FALSE
94	chr15	29992409	29992915	507		50.78236	25746.654	677513	678019	27	5499	0.8001972	0.3968442	0.0796844	0.0796844	2.6445759	-2.316203e+00	-2.316203e+00	2.736392e+00	0.0000440	TRUE	0.0094385	TRUE	TJP1	NM_003257 NM_175610 NP_003248 NP_783297 XM_005254616 XM_005254617 XM_005254618 XM_005254619 XM_005254620 XM_005254621 XM_006720660 XM_006720661 XM_006725553 XM_006725554 XM_006725555 XM_006725556 XM_006725557 XM_006725558 XM_006725559 XM_006725560 XP_005254673 XP_005254674 XP_005254675 XP_005254676 XP_005254677 XP_005254678 XP_006720723 XP_006720724 XP_006725616 XP_006725617 XP_006725618 XP_006725619 XP_006725620 XP_006725621 XP_006725622 XP_006725623	inside exon	inside	121791	inside exon	0	27	27	3'UTR		122349	120432	0.34	FALSE
95	chr1	160112673	160113131	459		55.77779	25602.008	20310687	20311145	554	3845	1.5294118	0.3856209	0.2688453	0.4692810	4.9938998	-5.204070e-01	2.832689e-01	3.694912e+00	0.0000445	TRUE	0.0094423	TRUE	ATP1A2	NM_000702 NP_000693	inside exon	inside	15331	inside exon	0	16	16	3'UTR		16032	13726	0.34	FALSE
96	chr20	31396033	31396639	607		41.58531	25242.286	2810514	2811120	85	24597	6.7500000	2.1235585	2.9779242	1.7515651	20.1469522	4.878232e-01	-2.778393e-01	3.246006e+00	0.0000476	TRUE	0.0099907	TRUE	DNMT3B	NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046	NA	NA	0	NA	NA	NA	5	NA		0	0	0.35	FALSE
97	chr13	43444949	43445318	370		66.88154	24746.169	2383962	2384331	57	13438	0.8098649	0.0545946	0.0870270	0.0545946	3.0432432	6.727054e-01	0.000000e+00	5.800708e+00	0.0000505	TRUE	0.0104472	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	121089	NA	NA	NA	13	NA		105883	103915	0.36	FALSE
98	chrX	91356076	91356404	329		74.68653	24571.869	5969558	5969886	243	5561	1.9784195	0.1227964	0.0680851	0.0832827	7.6395137	-8.508566e-01	-5.601794e-01	5.959141e+00	0.0000513	TRUE	0.0104472	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	265616	inside intron	99970	3	7	inside transcription region		787768	632811	0.36	FALSE
99	chrX	113706508	113706943	436		56.35750	24571.869	6942976	6943411	299	5443	5.4100917	0.2316514	0.2362385	0.5027523	20.6697248	2.828900e-02	1.117892e+00	6.479420e+00	0.0000513	TRUE	0.0104472	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	upstream	upstream	111608	NA	NA	NA	6	NA		326073	180632	0.36	FALSE
100	chr2	5834933	5835266	334		73.18044	24442.265	204353	204686	16	8660	0.5862275	0.0000000	0.0604790	0.0000000	2.2844311	1.000000e+100	NaN	1.000000e+100	0.0000523	TRUE	0.0104668	TRUE	SOX11	NM_003108 NP_003099	inside exon	inside	2134	inside exon	0	1	1	3'UTR		8718	1325	0.36	FALSE
101	chr13	51745723	51746050	328		74.39013	24399.962	3595587	3595914	92	10662	0.9198171	0.0310976	0.0000000	0.0000000	3.6481707	-1.000000e+100	-1.000000e+100	6.874228e+00	0.0000525	TRUE	0.0104668	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.36	FALSE
102	chrX	113706007	113706362	356		67.85693	24157.066	6942526	6942881	299	5443	1.8387640	0.2331461	0.1308989	0.1674157	6.8235955	-8.327814e-01	-4.777990e-01	4.871226e+00	0.0000547	TRUE	0.0108127	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	upstream	upstream	112189	NA	NA	NA	6	NA		326073	180632	0.36	FALSE
103	chr17	47130236	47130587	352		67.16237	23641.155	9734949	9735300	231	18864	1.0309659	0.0000000	0.0000000	0.0000000	4.1238636	NaN	NaN	1.000000e+100	0.0000604	TRUE	0.0115930	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	55462	inside exon	0	13	13	3'UTR		58733	51698	0.37	FALSE
104	chr13	56151776	56152168	393		60.13426	23632.764	3923714	3924106	121	13379	0.8391858	0.0000000	0.0000000	0.0000000	3.3567430	NaN	NaN	1.000000e+100	0.0000604	TRUE	0.0115930	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.37	FALSE
105	chr7	83093794	83094086	293		80.64764	23629.759	8282349	8282641	218	5588	0.9822526	0.0000000	0.0000000	0.0689420	3.8600683	NaN	1.000000e+100	1.000000e+100	0.0000604	TRUE	0.0115930	TRUE	SEMA3E	NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250	inside intron	inside	184393	inside intron	-1712	4	17	inside transcription region		285257	280956	0.37	FALSE
106	chr1	55530234	55530488	255		91.96561	23451.231	9839764	9840018	252	890	0.6260784	0.0000000	0.0000000	0.0000000	2.5043137	NaN	NaN	1.000000e+100	0.0000625	TRUE	0.0118844	TRUE	PCSK9	NM_174936 NP_777596 NR_110451	NA	NA	0	NA	NA	NA	10	NA		0	0	0.37	FALSE
107	chr12	59715674	59715980	307		75.13775	23067.291	7618611	7618917	197	6694	0.5486971	0.0000000	0.0000000	0.0000000	2.1947883	NaN	NaN	1.000000e+100	0.0000677	TRUE	0.0126066	TRUE	SLC16A7	NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756	upstream	upstream	273841	NA	NA	NA	6	NA		193814	74877	0.37	FALSE
108	chr3	54672043	54672431	389		59.19801	23028.026	7095638	7096026	171	7351	4.6195373	0.3984576	0.4904884	0.7794344	16.8097686	2.997930e-01	9.680015e-01	5.398730e+00	0.0000680	TRUE	0.0126066	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.38	FALSE
109	chr6	123104862	123105128	267		86.17874	23009.725	11688954	11689220	327	4353	0.8370787	0.0000000	0.0000000	0.0000000	3.3483146	NaN	NaN	1.000000e+100	0.0000682	TRUE	0.0126066	TRUE	FABP7	NM_001446 NP_001437 XM_005266858 XP_005266915	inside exon	inside	4216	inside exon	0	4	4	overlaps 3'UTR		4572	3972	0.38	FALSE
110	chr12	53298442	53298830	389		58.61494	22801.214	6338229	6338617	154	7844	2.5528278	0.4000000	0.4077121	0.0591260	9.3444730	2.755070e-02	-2.758136e+00	4.546041e+00	0.0000715	TRUE	0.0130566	TRUE	KRT8	NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962	overlaps exon upstream	inside	44820	overlaps exon upstream	0	2	9	overlaps 5' UTR		52679	7553	0.38	FALSE
111	chr12	8947733	8948024	292		77.84411	22730.479	1367587	1367878	52	8328	1.6837329	0.1191781	0.1082192	0.0000000	6.5075342	-1.391627e-01	-1.000000e+100	5.770920e+00	0.0000719	TRUE	0.0130566	TRUE	RIMKLB	NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191	NA	NA	0	NA	NA	NA	9	NA		0	0	0.38	FALSE
112	chr12	77252526	77252808	283		79.53469	22508.318	9318545	9318827	243	7516	3.2035336	0.5893993	1.2565371	0.8084806	10.1597173	1.092136e+00	4.559678e-01	4.107471e+00	0.0000750	TRUE	0.0134944	TRUE	CSRP2	NM_001321 NP_001312 XM_005268678 XM_006719258 XM_006719259 XP_005268735 XP_006719321 XP_006719322	inside exon	inside	19991	inside exon	0	6	6	overlaps 3'UTR		20303	7308	0.38	FALSE
113	chr2	1635679	1636004	326		67.80443	22104.245	68440	68765	2	3615	1.3033742	0.6865031	0.2453988	0.0000000	4.2815951	-1.484138e+00	-1.000000e+100	2.640810e+00	0.0000810	TRUE	0.0144329	TRUE	PXDN	NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959	inside exon	inside	112287	inside exon	0	23	23	3'UTR		112632	110251	0.38	FALSE
114	chr2	241655946	241656215	270		81.67407	22052.000	23642804	23643073	634	13166	1.2807407	0.0000000	0.1437037	0.0000000	4.9792593	1.000000e+100	NaN	1.000000e+100	0.0000817	TRUE	0.0144329	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	103510	inside exon	0	49	49	3'UTR		106544	80388	0.38	FALSE
115	chr12	8940289	8940565	277		78.65179	21786.546	1365993	1366269	52	8328	1.6061372	0.0851986	0.1776173	0.0000000	6.1617329	1.059872e+00	-1.000000e+100	6.176363e+00	0.0000877	TRUE	0.0153588	TRUE	RIMKLB	NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191	NA	NA	0	NA	NA	NA	9	NA		0	0	0.39	FALSE
116	chr5	141691534	141691844	311		69.61142	21649.151	12324960	12325270	384	14439	0.7366559	0.0000000	0.0649518	0.0000000	2.8816720	1.000000e+100	NaN	1.000000e+100	0.0000912	TRUE	0.0157991	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	12776	inside exon	0	3	3	3'UTR		14628	5556	0.40	FALSE
117	chr3	57127164	57127581	418		51.75050	21631.708	7280702	7281119	180	8154	0.7416268	0.0688995	0.0000000	0.0966507	2.8009569	-1.000000e+100	4.882865e-01	5.345282e+00	0.0000921	TRUE	0.0157991	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	inside exon	inside	76750	inside exon	0	14	14	3'UTR		80321	13261	0.40	FALSE
118	chr6	31132250	31132644	395		54.69255	21603.557	3618995	3619389	80	1705	16.0434177	1.9422785	3.5048101	1.3387342	57.3878481	8.515862e-01	-5.368805e-01	4.884923e+00	0.0000925	TRUE	0.0157991	TRUE	POU5F1	NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034	inside exon	inside	5807	inside exon	0	5	5	overlaps 3'UTR		6337	6019	0.40	FALSE
119	chr1	62676130	62676601	472		45.44083	21448.072	10232381	10232852	267	17384	6.9179025	1.8491525	3.6368644	2.1038136	20.0817797	9.758309e-01	1.861426e-01	3.440951e+00	0.0000963	TRUE	0.0162176	TRUE	L1TD1	NM_001164835 NM_019079 NP_001158307 NP_061952	inside exon	inside	15656	inside exon	0	5	5	inside transcription region		17527	4743	0.40	FALSE
120	chr7	83093042	83093321	280		76.46170	21409.276	8281648	8281927	218	5588	1.6289286	0.0000000	0.0714286	0.0721429	6.3721429	1.000000e+100	1.000000e+100	1.000000e+100	0.0000971	TRUE	0.0162176	TRUE	SEMA3E	NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250	inside intron	inside	185158	inside intron	-2477	4	17	inside transcription region		285257	280956	0.41	FALSE
121	chr12	53293559	53293849	291		73.45115	21374.285	6337572	6337862	154	7844	3.8817869	1.1230241	0.7635739	0.2838488	13.3567010	-5.565492e-01	-1.984194e+00	3.572103e+00	0.0000974	TRUE	0.0162176	TRUE	KRT8	NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962	inside exon	inside	49801	inside exon	0	6	9	inside transcription region		52679	7553	0.41	FALSE
122	chr11	67387645	67387979	335		63.64299	21320.402	7448990	7449324	229	2553	1.4961194	0.2411940	0.1808955	0.2238806	5.3385075	-4.150375e-01	-1.074647e-01	4.468170e+00	0.0000982	TRUE	0.0162186	TRUE	DOC2GP	NR_033791	NA	NA	0	NA	NA	NA	5	NA		0	0	0.41	FALSE
123	chr1	223197946	223198272	327		65.03143	21265.278	26366643	26366969	754	8216	5.6269113	0.0856269	0.0146789	0.1412844	22.2660550	-2.544320e+00	7.224660e-01	8.022566e+00	0.0000995	TRUE	0.0162993	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	209515	NA	NA	NA	10	NA		190906	63148	0.41	FALSE
124	chr4	88843313	88843553	241		87.33936	21048.785	6770443	6770683	233	15558	1.8672199	0.0000000	0.0000000	0.0000000	7.4688797	NaN	NaN	1.000000e+100	0.0001039	TRUE	0.0168489	TRUE	SPP1	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 NP_000573 NP_001035147 NP_001035149 NP_001238758 NP_001238759	upstream	upstream	53249	NA	NA	NA	7	NA		7761	6000	0.41	FALSE
125	chr3	54668373	54668634	262		80.18192	21007.663	7092494	7092755	171	7351	2.3643130	0.0000000	0.0000000	0.0000000	9.4572519	NaN	NaN	1.000000e+100	0.0001045	TRUE	0.0168489	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.41	FALSE
126	chr2	241654499	241654764	266		78.84984	20974.059	23641384	23641649	634	13166	0.8045113	0.0000000	0.0000000	0.0000000	3.2180451	NaN	NaN	1.000000e+100	0.0001057	TRUE	0.0168666	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	104961	inside exon	0	49	49	3'UTR		106544	80388	0.41	FALSE
127	chr16	3139519	3139795	277		75.61160	20944.412	1054385	1054661	35	10352	1.0440433	0.0440433	0.0729242	0.0000000	4.0592058	7.274741e-01	-1.000000e+100	6.526130e+00	0.0001063	TRUE	0.0168666	TRUE	ZSCAN10	NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194	inside exon	inside	9498	inside exon	0	5	5	inside transcription region		10398	1160	0.41	FALSE
128	chr3	57124044	57124288	245		85.09060	20847.197	7278420	7278664	180	8154	0.9628571	0.0000000	0.0914286	0.0000000	3.7600000	1.000000e+100	NaN	1.000000e+100	0.0001083	TRUE	0.0170412	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	inside exon	inside	80043	inside exon	0	14	14	3'UTR		80321	13261	0.41	FALSE
129	chr2	5835386	5835692	307		66.34755	20368.698	204781	205087	16	8660	0.8980456	0.0000000	0.0000000	0.0664495	3.5257329	NaN	1.000000e+100	1.000000e+100	0.0001195	TRUE	0.0186570	TRUE	SOX11	NM_003108 NP_003099	inside exon	inside	2587	inside exon	0	1	1	3'UTR		8718	1325	0.41	FALSE
130	chr1	223202201	223202478	278		72.56840	20174.014	26370172	26370449	754	8216	1.1839928	0.0000000	0.0000000	0.0366906	4.6992806	NaN	1.000000e+100	1.000000e+100	0.0001243	TRUE	0.0191279	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	213770	NA	NA	NA	10	NA		190906	63148	0.42	FALSE
131	chr15	79051563	79051766	204		98.77198	20149.485	8032465	8032668	235	8293	0.6906863	0.1735294	0.0000000	0.0000000	2.5892157	-1.000000e+100	-1.000000e+100	3.899263e+00	0.0001245	TRUE	0.0191279	TRUE	ADAMTS7	NM_014272 NP_055087 XM_005254137 XM_005254138 XP_005254194 XP_005254195	inside exon	inside	52007	inside exon	0	24	24	overlaps 3'UTR		52228	51799	0.42	FALSE
132	chr10	53794667	53795040	374		53.79952	20121.021	5589878	5590251	138	5761	1.8275401	0.1080214	0.3748663	0.0540107	6.7732620	1.795059e+00	-1.000000e+00	5.970462e+00	0.0001255	TRUE	0.0191279	TRUE	PRKG1	NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029	inside intron	inside	960433	inside intron	19204	6	18	inside transcription region		1223876	1219309	0.42	FALSE
133	chr6	167650683	167650996	314		64.03361	20106.553	16098222	16098535	425	3952	0.7358280	0.0000000	0.0000000	0.0000000	2.9433121	NaN	NaN	1.000000e+100	0.0001263	TRUE	0.0191279	TRUE	UNC93A	NM_001143947 NM_018974 NP_001137419 NP_061847	upstream	upstream	53807	NA	NA	NA	8	NA		24699	23962	0.42	FALSE
134	chr4	180090833	180091150	318		62.83461	19981.405	12310104	12310421	468	3689	0.7690252	0.0000000	0.0000000	0.0000000	3.0761006	NaN	NaN	1.000000e+100	0.0001307	TRUE	0.0194981	TRUE	LINC01098	NM_001085490 NR_028342	NA	NA	0	NA	NA	NA	6	NA		0	0	0.42	FALSE
135	chr13	100637856	100638092	237		84.30310	19979.834	5450530	5450766	193	5501	0.9229958	0.0000000	0.0000000	0.0000000	3.6919831	NaN	NaN	1.000000e+100	0.0001307	TRUE	0.0194981	TRUE	ZIC2	NM_007129 NP_009060	inside exon	inside	3830	inside exon	0	3	3	overlaps 3'UTR		4993	3617	0.42	FALSE
136	chr11	67394001	67394284	284		69.64580	19779.408	7449788	7450071	230	770	2.6063380	0.4098592	1.3838028	0.6816901	7.9500000	1.755438e+00	7.339879e-01	4.277755e+00	0.0001367	TRUE	0.0202391	TRUE	NUDT8	NM_001243750 NM_181843 NP_001230679 NP_862826	downstream	downstream	3124	NA	NA	NA	3	NA		1999	1606	0.42	FALSE
137	chr6	105530495	105530937	443		44.55293	19736.950	9857372	9857814	278	4151	0.6364560	0.0000000	0.0000000	0.0000000	2.5458239	NaN	NaN	1.000000e+100	0.0001376	TRUE	0.0202391	TRUE	LIN28B	NM_001004317 NP_001004317 XM_006715477 XP_006715540	inside exon	inside	124521	inside exon	0	4	4	3'UTR		125233	99901	0.42	FALSE
138	chr15	40092127	40092325	199		98.51468	19604.422	1663185	1663383	59	2951	0.8150754	0.3155779	0.0522613	0.0874372	2.8050251	-2.594181e+00	-1.851677e+00	3.151946e+00	0.0001412	TRUE	0.0206134	TRUE	GPR176	NM_001271854 NM_001271855 NM_007223 NP_001258783 NP_001258784 NP_009154 XM_005254139 XM_006720379 XP_005254196 XP_006720442	inside exon	inside	120768	inside exon	0	4	4	3'UTR		121870	118894	0.42	FALSE
139	chr15	26792379	26792641	263		73.99604	19460.959	475455	475717	11	4122	0.5060837	0.0000000	0.0000000	0.0000000	2.0243346	NaN	NaN	1.000000e+100	0.0001466	TRUE	0.0212409	TRUE	GABRB3	NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801	inside exon	inside	392045	inside exon	0	10	10	3'UTR		395992	391643	0.42	FALSE
140	chr3	32937402	32937637	236		81.95429	19341.213	3398408	3398643	82	7451	1.3739407	0.4923729	0.1711864	0.0855932	4.7466102	-1.524183e+00	-2.524183e+00	3.269074e+00	0.0001509	TRUE	0.0217194	TRUE	TRIM71	NM_001039111 NP_001034200	downstream	downstream	77892	NA	NA	NA	4	NA		74261	73730	0.42	FALSE
141	chrX	91358468	91358787	320		60.28014	19289.645	5971733	5972052	243	5561	0.6662500	0.0000000	0.0000000	0.0000000	2.6650000	NaN	NaN	1.000000e+100	0.0001539	TRUE	0.0218043	TRUE	PCDH11X	NM_001168360 NM_001168361 NM_001168362 NM_001168363 NM_014522 NM_032967 NM_032968 NM_032969 NP_001161832 NP_001161833 NP_001161834 NP_001161835 NP_055337 NP_116749 NP_116750 NP_116751	inside intron	inside	268008	inside intron	97587	3	7	inside transcription region		787768	632811	0.43	FALSE
142	chr8	115258525	115258535	11		1752.20530	19274.258	8030168	8030178	291	2231	0.7863636	0.0363636	0.0545455	0.0000000	3.0545455	5.849625e-01	-1.000000e+100	6.392317e+00	0.0001542	TRUE	0.0218043	TRUE	CSMD3	NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757	upstream	upstream	809283	NA	NA	NA	71	NA		1214083	1212083	0.43	FALSE
143	chr15	55903997	55904250	254		75.71119	19230.642	4216911	4217164	141	5154	0.7375984	0.0000000	0.0000000	0.0000000	2.9503937	NaN	NaN	1.000000e+100	0.0001555	TRUE	0.0218043	TRUE	PRTG	NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451	inside exon	inside	130927	inside exon	0	20	20	3'UTR		131438	122919	0.43	FALSE
144	chr12	66358333	66358673	341		56.31666	19203.980	8151023	8151363	215	2964	1.2438416	0.1571848	0.2862170	0.0000000	4.5319648	8.646481e-01	-1.000000e+100	4.849603e+00	0.0001565	TRUE	0.0218043	TRUE	HMGA2	NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958	inside exon	inside	140093	inside exon	0	5	5	3'UTR		141831	138021	0.43	FALSE
145	chr15	55905004	55905415	412		46.55812	19181.945	4217662	4218073	141	5154	0.5822816	0.0000000	0.0000000	0.0000000	2.3291262	NaN	NaN	1.000000e+100	0.0001569	TRUE	0.0218043	TRUE	PRTG	NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451	inside exon	inside	129762	inside exon	0	20	20	3'UTR		131438	122919	0.43	FALSE
146	chr4	187163189	187163451	263		72.70776	19122.140	12655597	12655859	493	5193	1.1982890	0.1178707	0.2212928	0.0646388	4.3893536	9.087509e-01	-8.667335e-01	5.218731e+00	0.0001586	TRUE	0.0218788	TRUE	KLKB1	NM_000892 NP_000883 XM_005262987 XM_006714213 XP_005263044 XP_006714276	inside intron	inside	14517	inside intron	-3670	7	15	inside transcription region		30953	25911	0.43	FALSE
147	chr3	32936380	32936810	431		44.09218	19003.729	3397461	3397891	82	7451	1.0386311	0.2904872	0.2116009	0.0000000	3.6524362	-4.571288e-01	-1.000000e+100	3.652312e+00	0.0001636	TRUE	0.0223339	TRUE	TRIM71	NM_001039111 NP_001034200	downstream	downstream	76870	NA	NA	NA	4	NA		74261	73730	0.43	FALSE
148	chr14	93397710	93398047	338		56.17366	18986.697	8679091	8679428	253	12111	1.2159763	0.0000000	0.0000000	0.1112426	4.7526627	NaN	1.000000e+100	1.000000e+100	0.0001641	TRUE	0.0223339	TRUE	CHGA	NM_001275 NP_001266 XM_005267292 XM_006725160 XP_005267349 XP_006725223	inside intron	inside	8265	inside intron	668	6	7	inside transcription region		12193	11524	0.43	FALSE
149	chr1	17301039	17301322	284		66.37672	18850.988	2835158	2835441	74	6061	1.9545775	0.1422535	0.1985915	0.0119718	7.4654930	4.813399e-01	-3.570749e+00	5.713701e+00	0.0001686	TRUE	0.0226563	TRUE	MFAP2	NM_001135247 NM_001135248 NM_002403 NM_017459 NP_001128719 NP_001128720 NP_002394 NP_059453	inside exon	inside	6759	inside exon	0	9	9	3'UTR		7082	3353	0.43	FALSE
150	chr3	54667104	54667361	258		72.91943	18813.212	7091550	7091807	171	7351	0.8728682	0.0000000	0.0000000	0.0000000	3.4914729	NaN	NaN	1.000000e+100	0.0001698	TRUE	0.0226563	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.43	FALSE
151	chr15	55907499	55907772	274		68.53608	18778.886	4219326	4219599	141	5154	0.5806569	0.0000000	0.0000000	0.0000000	2.3226277	NaN	NaN	1.000000e+100	0.0001715	TRUE	0.0226563	TRUE	PRTG	NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451	inside exon	inside	127405	inside exon	0	20	20	3'UTR		131438	122919	0.44	FALSE
152	chr1	63786600	63786861	262		71.63101	18767.325	10288923	10289184	272	2673	1.0572519	0.0000000	0.0000000	0.0000000	4.2290076	NaN	NaN	1.000000e+100	0.0001720	TRUE	0.0226563	TRUE	FOXD3	NM_012183 NP_036315	promoter	promoter	1869	NA	NA	NA	1	NA		2067	1436	0.44	FALSE
153	chr19	17713281	17713584	304		61.63162	18736.011	4871723	4872026	149	4082	0.8564145	0.0664474	0.0000000	0.0000000	3.3592105	-1.000000e+100	-1.000000e+100	5.659766e+00	0.0001741	TRUE	0.0226563	TRUE	UNC13A	NM_001080421 NP_001073890 XM_006722692 XP_006722755	inside exon	inside	85466	inside exon	0	44	44	3'UTR		86913	82145	0.44	FALSE
154	chr3	54669413	54669639	227		82.46499	18719.552	7093485	7093711	171	7351	0.7030837	0.0000000	0.0000000	0.0000000	2.8123348	NaN	NaN	1.000000e+100	0.0001746	TRUE	0.0226563	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.44	FALSE
155	chr22	31531180	31531524	345		54.25398	18717.623	2714029	2714373	72	5042	0.6847826	0.0000000	0.0000000	0.0000000	2.7391304	NaN	NaN	1.000000e+100	0.0001748	TRUE	0.0226563	TRUE	PLA2G3	NM_015715 NP_056530	inside exon	inside	4945	inside exon	0	7	7	3'UTR		5676	4631	0.44	FALSE
156	chr9	133996715	133997019	305		61.31252	18700.319	11060029	11060333	391	5341	0.9900000	0.0111475	0.0616393	0.2780328	3.6091803	2.467126e+00	4.640458e+00	8.338802e+00	0.0001759	TRUE	0.0226563	TRUE	AIF1L	NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701	inside exon	inside	18525	inside exon	0	5	5	3'UTR		20349	17441	0.44	FALSE
157	chr3	57125494	57125759	266		70.25792	18688.608	7279635	7279900	180	8154	0.6473684	0.0000000	0.1248120	0.0000000	2.4646617	1.000000e+100	NaN	1.000000e+100	0.0001766	TRUE	0.0226563	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	inside exon	inside	78572	inside exon	0	14	14	3'UTR		80321	13261	0.44	FALSE
158	chr14	77597646	77597924	279		66.53822	18564.164	7116589	7116867	221	2474	0.6973118	0.0000000	0.0000000	0.0000000	2.7892473	NaN	NaN	1.000000e+100	0.0001816	TRUE	0.0231540	TRUE	ZDHHC22	NM_174976 NP_777636 XM_006720119 XM_006720120 XP_006720182 XP_006720183	inside exon	inside	10210	inside exon	0	3	3	3'UTR		10521	6055	0.45	FALSE
159	chr12	3152762	3153046	285		64.41004	18356.861	516732	517016	17	7995	0.5078947	0.0000000	0.0000000	0.0000000	2.0315789	NaN	NaN	1.000000e+100	0.0001895	TRUE	0.0240155	TRUE	TEAD4	NM_003213 NM_201441 NM_201443 NP_003204 NP_958849 NP_958851	downstream	downstream	84284	NA	NA	NA	13	NA		81364	45711	0.45	FALSE
160	chr4	187517694	187517992	299		61.27940	18322.540	12660219	12660517	495	8642	0.4882943	0.0548495	0.0000000	0.0000000	1.8983278	-1.000000e+100	-1.000000e+100	5.113107e+00	0.0001908	TRUE	0.0240288	TRUE	FAT1	NM_005245 NP_005236 XM_005262834 XM_005262835 XM_006714139 XP_005262891 XP_005262892 XP_006714202	inside exon	inside	126995	inside exon	0	25	27	inside transcription region		136050	121235	0.45	FALSE
161	chr12	8940981	8941259	279		65.48813	18271.188	1366629	1366907	52	8328	0.9578853	0.0000000	0.0000000	0.0000000	3.8315412	NaN	NaN	1.000000e+100	0.0001921	TRUE	0.0240419	TRUE	RIMKLB	NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191	NA	NA	0	NA	NA	NA	9	NA		0	0	0.45	FALSE
162	chr4	55944827	55945099	273		66.66094	18198.436	4546694	4546966	135	3976	0.7190476	0.1289377	0.0000000	0.1457875	2.6014652	-1.000000e+100	1.771930e-01	4.334578e+00	0.0001959	TRUE	0.0243575	TRUE	KDR	NM_002253 NP_002244	inside exon	inside	46663	inside exon	0	30	30	3'UTR		47336	45352	0.45	FALSE
163	chr17	42875872	42876263	392		45.78819	17948.971	8246543	8246934	204	7091	0.7116071	0.0000000	0.0816327	0.0780612	2.6867347	1.000000e+100	1.000000e+100	1.000000e+100	0.0002082	TRUE	0.0257317	TRUE	GJC1	NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978	inside exon	inside	31916	inside exon	0	3	3	3'UTR		32363	1190	0.46	FALSE
164	chr19	45412265	45412647	383		46.28510	17727.193	9397278	9397660	286	3581	3.7096606	0.7263708	0.4699739	0.3618799	13.2804178	-6.281255e-01	-1.005195e+00	4.192451e+00	0.0002204	TRUE	0.0270692	TRUE	APOE	NM_000041 NP_000032 XM_005258867 XP_005258924	inside exon	inside	3226	inside exon	0	4	4	overlaps 3'UTR		3611	2625	0.46	FALSE
165	chr17	42877316	42877523	208		84.31504	17537.529	8247521	8247728	204	7091	0.7240385	0.0298077	0.0000000	0.0000000	2.8663462	-1.000000e+100	-1.000000e+100	6.587384e+00	0.0002296	TRUE	0.0279242	TRUE	GJC1	NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978	inside exon	inside	30656	inside exon	0	3	3	3'UTR		32363	1190	0.46	FALSE
166	chr16	3142738	3142928	191		91.78714	17531.344	1056170	1056360	35	10352	0.7159686	0.0000000	0.0000000	0.0680628	2.7958115	NaN	1.000000e+100	1.000000e+100	0.0002301	TRUE	0.0279242	TRUE	ZSCAN10	NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194	inside intron	inside	6365	inside intron	421	2	5	5' UTR		10398	1160	0.46	FALSE
167	chr1	62672335	62672750	416		41.83657	17404.012	10230631	10231046	267	17384	4.7506010	2.0971154	1.9677885	1.6754808	13.2620192	-9.183110e-02	-3.238311e-01	2.660822e+00	0.0002377	TRUE	0.0286767	TRUE	L1TD1	NM_001164835 NM_019079 NP_001158307 NP_061952	inside exon	inside	11861	inside exon	0	4	5	inside transcription region		17527	4743	0.47	FALSE
168	chr2	202901589	202901916	328		52.90786	17353.776	19695981	19696308	532	4463	3.2621951	1.5646341	1.0371951	0.7384146	9.7085366	-5.931380e-01	-1.083322e+00	2.633428e+00	0.0002406	TRUE	0.0288561	TRUE	FZD7	NM_003507 NP_003498	inside exon	inside	2279	inside exon	0	1	1	3'UTR		3850	1724	0.47	FALSE
169	chrX	113702145	113702508	364		47.54117	17304.987	6939366	6939729	299	5443	1.0049451	0.0554945	0.0412088	0.0390110	3.8840659	-4.293928e-01	-5.084644e-01	6.129079e+00	0.0002429	TRUE	0.0289099	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	upstream	upstream	116043	NA	NA	NA	6	NA		326073	180632	0.47	FALSE
170	chr10	53795194	53795486	293		58.99246	17284.791	5590361	5590653	138	5761	1.6184300	0.0000000	0.0000000	0.0000000	6.4737201	NaN	NaN	1.000000e+100	0.0002449	TRUE	0.0289099	TRUE	PRKG1	NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029	inside intron	inside	960960	inside intron	18758	6	18	inside transcription region		1223876	1219309	0.47	FALSE
171	chr2	1636572	1636933	362		47.63749	17244.772	69331	69692	2	3615	1.2704420	1.1469613	0.0000000	0.0000000	3.9348066	-1.000000e+100	-1.000000e+100	1.778476e+00	0.0002471	TRUE	0.0289099	TRUE	PXDN	NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959	inside exon	inside	111358	inside exon	0	23	23	3'UTR		112632	110251	0.47	FALSE
172	chr16	9764418	9764686	269		64.03400	17225.145	1951177	1951445	53	7029	0.6063197	0.0000000	0.0000000	0.0000000	2.4252788	NaN	NaN	1.000000e+100	0.0002479	TRUE	0.0289099	TRUE	GRIN2A	NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325	downstream	downstream	511577	NA	NA	NA	13	NA		428998	417262	0.47	FALSE
173	chr12	53291022	53291402	381		45.19639	17219.825	6336911	6337291	154	7844	3.4257218	0.7265092	0.6435696	0.7270341	11.6057743	-1.748850e-01	1.042000e-03	3.997718e+00	0.0002483	TRUE	0.0289099	TRUE	KRT8	NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962	inside exon	inside	52248	inside exon	0	9	9	overlaps 3'UTR		52679	7553	0.47	FALSE
174	chr5	141702405	141702576	172		99.82780	17170.382	12326979	12327150	384	14439	0.5017442	0.0000000	0.0000000	0.0000000	2.0069767	NaN	NaN	1.000000e+100	0.0002522	TRUE	0.0290650	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside intron	inside	2044	inside intron	-1833	1	3	5' UTR		14628	5556	0.47	FALSE
175	chr12	14858720	14859012	293		58.59039	17166.984	2665858	2666150	70	3841	3.2059727	0.4600683	1.0170648	0.9235495	10.4232082	1.144492e+00	1.005341e+00	4.501808e+00	0.0002525	TRUE	0.0290650	TRUE	GUCY2C	NM_004963 NP_004954	upstream	upstream	9201	NA	NA	NA	27	NA		83951	83331	0.47	FALSE
176	chr1	82456275	82456629	355		47.78197	16962.598	11405145	11405499	322	1848	0.8495775	0.1588732	0.0000000	0.0000000	3.2394366	-1.000000e+100	-1.000000e+100	4.349795e+00	0.0002638	TRUE	0.0301213	TRUE	LPHN2	NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560	inside exon	inside	40402	inside exon	0	17	17	inside transcription region		42234	40867	0.47	FALSE
177	chr13	43443659	43443896	238		71.25309	16958.235	2382869	2383106	57	13438	2.8855042	0.0000000	0.1546218	0.0000000	11.3873950	1.000000e+100	NaN	1.000000e+100	0.0002647	TRUE	0.0301213	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	122511	NA	NA	NA	13	NA		105883	103915	0.47	FALSE
178	chr20	38898173	38898369	197		85.31833	16807.712	4400851	4401047	116	5560	0.8195431	0.0000000	0.0000000	0.0000000	3.2781726	NaN	NaN	1.000000e+100	0.0002745	TRUE	0.0310719	TRUE	MAFB	NM_005461 NP_005452	downstream	downstream	419507	NA	NA	NA	1	NA		3359	971	0.47	FALSE
179	chr15	55904491	55904733	243		69.04419	16777.738	4217348	4217590	141	5154	0.6771605	0.0000000	0.0000000	0.0000000	2.7086420	NaN	NaN	1.000000e+100	0.0002771	TRUE	0.0311905	TRUE	PRTG	NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451	inside exon	inside	130444	inside exon	0	20	20	3'UTR		131438	122919	0.47	FALSE
180	chr13	56149564	56149785	222		75.29906	16716.392	3921997	3922218	121	13379	0.6331081	0.0000000	0.0000000	0.0000000	2.5324324	NaN	NaN	1.000000e+100	0.0002827	TRUE	0.0315100	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.48	FALSE
181	chr11	27639180	27639475	296		56.40421	16695.648	2971180	2971475	79	3618	0.8185811	0.1364865	0.0979730	0.0000000	3.0398649	-4.783024e-01	-1.000000e+100	4.477177e+00	0.0002844	TRUE	0.0315100	TRUE	BDNF-AS	NR_002832 NR_033312 NR_033313 NR_033314 NR_033315	NA	NA	0	NA	NA	NA	7	NA		0	0	0.48	FALSE
182	chr1	26751794	26751978	185		90.00906	16651.676	4578100	4578284	115	4415	3.7805405	0.0000000	0.1091892	0.1081081	14.9048649	1.000000e+100	1.000000e+100	1.000000e+100	0.0002874	TRUE	0.0315100	TRUE	LIN28A	NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963	inside exon	inside	14525	inside exon	0	3	4	inside transcription region		18950	15566	0.48	FALSE
183	chr19	45411017	45411209	193		86.23534	16643.420	9396571	9396763	286	3581	8.4696891	1.0455959	0.7388601	0.7979275	31.2963731	-5.009522e-01	-3.899958e-01	4.903598e+00	0.0002875	TRUE	0.0315100	TRUE	APOE	NM_000041 NP_000032 XM_005258867 XP_005258924	inside exon	inside	1978	inside exon	0	3	4	inside transcription region		3611	2625	0.48	FALSE
184	chr5	12654924	12655113	190		87.51284	16627.439	572315	572504	28	11045	0.5563158	0.0000000	0.0000000	0.0000000	2.2252632	NaN	NaN	1.000000e+100	0.0002880	TRUE	0.0315100	TRUE	LINC01194	NR_033383	NA	NA	0	NA	NA	NA	3	NA		0	0	0.48	FALSE
185	chr16	78011541	78011920	380		43.63403	16580.931	10468507	10468886	272	2496	0.8690789	0.0000000	0.1631579	0.0000000	3.3131579	1.000000e+100	NaN	1.000000e+100	0.0002909	TRUE	0.0315100	TRUE	VAT1L	NM_020927 NP_065978	inside exon	inside	189058	inside exon	0	9	9	overlaps 3'UTR		191518	189012	0.48	FALSE
186	chr16	51171047	51171331	285		58.17580	16580.103	7327827	7328111	178	4772	0.9682456	0.0000000	0.0000000	0.0000000	3.8729825	NaN	NaN	1.000000e+100	0.0002909	TRUE	0.0315100	TRUE	SALL1	NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304	inside exon	inside	13852	inside exon	0	3	3	inside transcription region		14160	4818	0.48	FALSE
187	chr3	181432039	181432215	177		93.48183	16546.284	16398282	16398458	513	2487	1.6810734	0.0000000	0.0000000	0.0000000	6.7242938	NaN	NaN	1.000000e+100	0.0002927	TRUE	0.0315337	TRUE	SOX2	NM_003106 NP_003097	inside exon	inside	2327	inside exon	0	1	1	3'UTR		2511	953	0.48	FALSE
188	chr12	97958447	97958752	306		53.61679	16406.737	10660467	10660772	300	1005	0.5341503	0.0000000	0.0000000	0.0000000	2.1366013	NaN	NaN	1.000000e+100	0.0003023	TRUE	0.0322374	TRUE	RMST	NR_024037	NA	NA	0	NA	NA	NA	7	NA		0	0	0.48	FALSE
189	chr13	56148503	56148852	350		46.86852	16403.982	3921119	3921468	121	13379	0.6100000	0.0000000	0.0000000	0.0000000	2.4400000	NaN	NaN	1.000000e+100	0.0003025	TRUE	0.0322374	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.48	FALSE
190	chr12	66358719	66358869	151		108.46248	16377.834	8151401	8151551	215	2964	1.3125828	0.0980132	0.0145695	0.0079470	5.1298013	-2.750022e+00	-3.624491e+00	5.709782e+00	0.0003047	TRUE	0.0323085	TRUE	HMGA2	NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958	inside exon	inside	140479	inside exon	0	5	5	3'UTR		141831	138021	0.48	FALSE
191	chr2	1637465	1637799	335		48.80229	16348.767	70123	70457	2	3615	0.7753731	0.1856716	0.0000000	0.0298507	2.8859701	-1.000000e+100	-2.636915e+00	3.958231e+00	0.0003065	TRUE	0.0323276	TRUE	PXDN	NM_012293 NP_036425 XM_005264707 XM_006711896 XP_005264764 XP_006711959	inside exon	inside	110492	inside exon	0	23	23	3'UTR		112632	110251	0.48	FALSE
192	chr17	47127429	47127676	248		65.22013	16174.592	9732837	9733084	231	18864	0.5397177	0.0000000	0.0000000	0.0000000	2.1588710	NaN	NaN	1.000000e+100	0.0003222	TRUE	0.0338101	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	52655	inside exon	0	13	13	3'UTR		58733	51698	0.48	FALSE
193	chr12	86272123	86272347	225		71.65176	16121.645	9619548	9619772	270	4255	0.7911111	0.0968889	0.0000000	0.0000000	3.0675556	-1.000000e+100	-1.000000e+100	4.984614e+00	0.0003268	TRUE	0.0341091	TRUE	NTS	NM_006183 NP_006174	inside exon	inside	4050	inside exon	0	3	4	inside transcription region		8697	7971	0.48	FALSE
194	chr8	72615278	72615449	172		93.20441	16031.158	5588144	5588315	201	1824	0.7985465	0.0000000	0.0000000	0.0000000	3.1941860	NaN	NaN	1.000000e+100	0.0003354	TRUE	0.0348260	TRUE	MSC	NM_005098 NP_005089	downstream	downstream	141282	NA	NA	NA	2	NA		2954	1517	0.48	FALSE
195	chr15	26790432	26790719	288		55.55003	15998.410	474285	474572	11	4122	0.6944444	0.0000000	0.0000000	0.0000000	2.7777778	NaN	NaN	1.000000e+100	0.0003391	TRUE	0.0348541	TRUE	GABRB3	NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801	inside exon	inside	393967	inside exon	0	10	10	3'UTR		395992	391643	0.48	FALSE
196	chrX	110790653	110790777	125		127.98424	15998.030	6862497	6862621	294	1078	0.6812000	0.0000000	0.1616000	0.0000000	2.5632000	1.000000e+100	NaN	1.000000e+100	0.0003391	TRUE	0.0348541	TRUE	LINC00890	NR_033974	NA	NA	0	NA	NA	NA	3	NA		0	0	0.48	FALSE
197	chr4	79464631	79465008	378		42.18790	15947.025	5859005	5859382	207	3243	0.8388889	0.0000000	0.1195767	0.0000000	3.2359788	1.000000e+100	NaN	1.000000e+100	0.0003438	TRUE	0.0351582	TRUE	FRAS1	NM_001166133 NM_020875 NM_025074 NM_032863 NM_206841 NP_001159605 NP_079350 XM_006714314 XM_006714315 XM_006714316 XM_006714317 XP_006714377 XP_006714378 XP_006714379 XP_006714380	inside exon	inside	485907	inside exon	0	74	74	3'UTR		486699	483114	0.49	FALSE
198	chr16	65267282	65267527	246		64.49669	15866.185	8197449	8197694	214	5478	0.7569106	0.0000000	0.0000000	0.0000000	3.0276423	NaN	NaN	1.000000e+100	0.0003510	TRUE	0.0353071	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.49	FALSE
199	chr2	5834481	5834771	291		54.52173	15865.825	204060	204350	16	8660	0.7340206	0.0116838	0.1353952	0.0694158	2.7195876	3.534589e+00	2.570749e+00	7.862729e+00	0.0003510	TRUE	0.0353071	TRUE	SOX11	NM_003108 NP_003099	inside exon	inside	1682	inside exon	0	1	1	3'UTR		8718	1325	0.49	FALSE
200	chr3	54669034	54669284	251		63.19846	15862.813	7093131	7093381	171	7351	0.7330677	0.0000000	0.0000000	0.0000000	2.9322709	NaN	NaN	1.000000e+100	0.0003513	TRUE	0.0353071	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.49	FALSE
201	chr12	59716601	59716802	202		78.46326	15849.578	7619014	7619215	197	6694	0.5435644	0.0000000	0.0000000	0.0000000	2.1742574	NaN	NaN	1.000000e+100	0.0003537	TRUE	0.0353071	TRUE	SLC16A7	NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756	upstream	upstream	273019	NA	NA	NA	6	NA		193814	74877	0.49	FALSE
202	chr4	41259209	41259371	163		97.17744	15839.922	3752656	3752818	117	11482	0.9107362	0.0000000	0.0000000	0.0000000	3.6429448	NaN	NaN	1.000000e+100	0.0003540	TRUE	0.0353071	TRUE	UCHL1	NM_004181 NP_004172	inside exon	inside	311	inside exon	0	2	8	5' UTR		11548	7357	0.49	FALSE
203	chr13	51747682	51747849	168		94.02348	15795.945	3597419	3597586	92	10662	3.1461310	0.0000000	0.0321429	0.1976190	12.3547619	1.000000e+100	1.000000e+100	1.000000e+100	0.0003589	TRUE	0.0355697	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.49	FALSE
204	chr15	78640269	78640559	291		54.21123	15775.468	7976705	7976995	233	291	2.0338488	0.1257732	0.0000000	0.0000000	8.0096220	-1.000000e+100	-1.000000e+100	5.992838e+00	0.0003602	TRUE	0.0355697	TRUE	CRABP1	NM_004378 NP_004369	inside exon	inside	7603	inside exon	0	4	4	overlaps 3'UTR		7906	7548	0.49	FALSE
205	chr15	65623388	65623552	165		95.20893	15709.474	5965529	5965693	184	8664	0.8603030	0.0000000	0.0000000	0.0000000	3.4412121	NaN	NaN	1.000000e+100	0.0003677	TRUE	0.0361295	TRUE	IGDCC3	NM_004884 NP_004875	inside exon	inside	25158	inside exon	0	8	12	inside transcription region		26982	6564	0.49	FALSE
206	chr7	83093323	83093530	208		75.17445	15636.285	8281928	8282135	218	5588	0.7120192	0.0000000	0.0000000	0.0000000	2.8480769	NaN	NaN	1.000000e+100	0.0003740	TRUE	0.0365728	TRUE	SEMA3E	NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250	inside intron	inside	184949	inside intron	-2268	4	17	inside transcription region		285257	280956	0.49	FALSE
207	chr5	141691149	141691465	317		49.05286	15549.758	12324643	12324959	384	14439	1.2009464	0.0643533	0.0000000	0.0000000	4.7394322	-1.000000e+100	-1.000000e+100	6.202556e+00	0.0003836	TRUE	0.0371794	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	13155	inside exon	0	3	3	3'UTR		14628	5556	0.49	FALSE
208	chr2	241656293	241656499	207		75.08310	15542.202	23643095	23643301	634	13166	0.5500000	0.0000000	0.0000000	0.0000000	2.2000000	NaN	NaN	1.000000e+100	0.0003839	TRUE	0.0371794	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	103226	inside exon	0	49	49	3'UTR		106544	80388	0.49	FALSE
209	chr22	45938035	45938163	129		120.31276	15520.346	5802240	5802368	151	2298	2.2779070	0.0496124	0.5503876	0.4682171	8.0434109	3.471675e+00	3.238405e+00	7.340963e+00	0.0003868	TRUE	0.0372144	TRUE	FBLN1	NM_001996 NM_006485 NM_006486 NM_006487 NP_001987 NP_006476 NP_006477 NP_006478	inside exon	inside	39316	inside exon	0	10	17	inside transcription region		98295	97460	0.49	FALSE
210	chr1	156640863	156641065	203		76.41499	15512.243	19869882	19870084	536	8487	1.3009852	0.9004926	0.0000000	0.0679803	4.2354680	-1.000000e+100	-3.727526e+00	2.233735e+00	0.0003879	TRUE	0.0372144	TRUE	NES	NM_006617 NP_006608	inside exon	inside	6124	inside exon	0	4	4	inside transcription region		8633	7942	0.49	FALSE
211	chr2	47606908	47607108	201		77.03507	15484.050	5239078	5239278	126	1012	1.1281095	0.0000000	0.0338308	0.1482587	4.3303483	1.000000e+100	1.000000e+100	1.000000e+100	0.0003910	TRUE	0.0373323	TRUE	EPCAM	NM_002354 NP_002345	inside exon	inside	10621	inside exon	0	7	9	inside transcription region		17880	17107	0.49	FALSE
212	chr13	100637200	100637363	164		94.11675	15435.148	5450272	5450435	193	5501	1.0506098	0.0000000	0.0000000	0.0000000	4.2024390	NaN	NaN	1.000000e+100	0.0003954	TRUE	0.0375724	TRUE	ZIC2	NM_007129 NP_009060	inside exon	inside	3174	inside exon	0	2	3	inside transcription region		4993	3617	0.49	FALSE
213	chr10	53796051	53796454	404		38.12607	15402.930	5590917	5591320	138	5761	1.1121287	0.2915842	0.0985149	0.0485149	4.0099010	-1.565499e+00	-2.587414e+00	3.781582e+00	0.0003982	TRUE	0.0376568	TRUE	PRKG1	NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029	inside intron	inside	961817	inside intron	17790	6	18	inside transcription region		1223876	1219309	0.49	FALSE
214	chr4	187518012	187518253	242		63.47009	15359.763	12660537	12660778	495	8642	0.7297521	0.0677686	0.0000000	0.0000000	2.8512397	-1.000000e+100	-1.000000e+100	5.394829e+00	0.0004024	TRUE	0.0378778	TRUE	FAT1	NM_005245 NP_005236 XM_005262834 XM_005262835 XM_006714139 XP_005262891 XP_005262892 XP_006714202	inside exon	inside	126734	inside exon	0	25	27	inside transcription region		136050	121235	0.49	FALSE
215	chr6	114744658	114744839	182		84.23988	15331.658	11096100	11096281	302	5708	1.7788462	0.0000000	0.0000000	0.0000000	7.1153846	NaN	NaN	1.000000e+100	0.0004066	TRUE	0.0380869	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	81118	NA	NA	NA	5	NA		286790	5588	0.50	FALSE
216	chr13	43442889	43443130	242		63.28694	15315.440	2382406	2382647	57	13438	2.3822314	0.2297521	0.3338843	0.1661157	8.7991736	5.392704e-01	-4.678894e-01	5.259218e+00	0.0004084	TRUE	0.0380869	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	123277	NA	NA	NA	13	NA		105883	103915	0.50	FALSE
217	chr20	31396719	31397160	442		34.47672	15238.711	2811200	2811641	85	24597	6.9459276	2.0217195	2.9633484	3.3936652	19.4049774	5.516454e-01	7.472614e-01	3.262772e+00	0.0004168	TRUE	0.0386944	TRUE	DNMT3B	NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046	NA	NA	0	NA	NA	NA	5	NA		0	0	0.50	FALSE
218	chr2	202902438	202902757	320		47.40455	15169.455	19696830	19697149	532	4463	2.6135937	0.5362500	0.7631250	0.7468750	8.4081250	5.090136e-01	4.779611e-01	3.970807e+00	0.0004248	TRUE	0.0391021	TRUE	FZD7	NM_003507 NP_003498	inside exon	inside	3128	inside exon	0	1	1	3'UTR		3850	1724	0.50	FALSE
219	chr15	26789903	26790131	229		66.22928	15166.504	473824	474052	11	4122	0.8495633	0.0000000	0.0131004	0.0000000	3.3851528	1.000000e+100	NaN	1.000000e+100	0.0004251	TRUE	0.0391021	TRUE	GABRB3	NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801	inside exon	inside	394555	inside exon	0	10	10	3'UTR		395992	391643	0.50	FALSE
220	chr1	82456730	82456962	233		64.78509	15094.925	11405513	11405745	322	1848	0.9006438	0.0248927	0.0000000	0.0000000	3.5776824	-1.000000e+100	-1.000000e+100	7.167159e+00	0.0004332	TRUE	0.0396041	TRUE	LPHN2	NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560	inside exon	inside	40857	inside exon	0	17	17	overlaps 3'UTR		42234	40867	0.50	FALSE
221	chr3	54668710	54669019	310		48.63176	15075.847	7092821	7093130	171	7351	1.6266129	0.1303226	0.1954839	0.1954839	5.9851613	5.849625e-01	5.849625e-01	5.521231e+00	0.0004363	TRUE	0.0396041	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.50	FALSE
222	chrX	113704150	113704496	347		43.43679	15072.566	6940951	6941297	299	5443	2.6778098	0.1279539	0.1527378	0.2576369	10.1729107	2.554327e-01	1.009715e+00	6.312965e+00	0.0004364	TRUE	0.0396041	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	upstream	upstream	114055	NA	NA	NA	6	NA		326073	180632	0.50	FALSE
223	chr2	5841087	5841512	426		35.31585	15044.551	206324	206749	16	8660	0.7922535	0.1422535	0.0807512	0.0000000	2.9460094	-8.169092e-01	-1.000000e+100	4.372226e+00	0.0004390	TRUE	0.0396609	TRUE	SOX11	NM_003108 NP_003099	inside exon	inside	8288	inside exon	0	1	1	3'UTR		8718	1325	0.50	FALSE
224	chr2	168729265	168729344	80		187.44600	14995.680	16192157	16192236	428	1807	0.4981250	0.0000000	0.0000000	0.0000000	1.9925000	NaN	NaN	1.000000e+100	0.0004434	TRUE	0.0398778	TRUE	B3GALT1	NM_020981 NP_066191 XM_005246931 XM_006712819 XP_005246988 XP_006712882	downstream	downstream	54083	NA	NA	NA	2	NA		52184	980	0.50	FALSE
225	chr18	6949100	6949258	159		93.96821	14940.945	515514	515672	17	3800	0.6386792	0.0000000	0.0000000	0.0000000	2.5547170	NaN	NaN	1.000000e+100	0.0004494	TRUE	0.0402379	TRUE	LAMA1	NM_005559 NP_005550	inside exon	inside	168555	inside exon	0	58	62	inside transcription region		176070	95663	0.50	FALSE
226	chr8	114523076	114523264	189		78.84354	14901.428	8020886	8021074	290	3097	1.0222222	0.0000000	0.0000000	0.0000000	4.0888889	NaN	NaN	1.000000e+100	0.0004544	TRUE	0.0405081	TRUE	CSMD3	NM_052900 NM_198123 NM_198124 NP_443132 NP_937756 NP_937757	upstream	upstream	73834	NA	NA	NA	71	NA		1214083	1212083	0.50	FALSE
227	chr3	57124729	57125025	297		50.10517	14881.234	7279023	7279319	180	8154	0.7171717	0.0000000	0.0000000	0.0000000	2.8686869	NaN	NaN	1.000000e+100	0.0004570	TRUE	0.0405600	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	inside exon	inside	79306	inside exon	0	14	14	3'UTR		80321	13261	0.50	FALSE
228	chr5	2746603	2746840	238		62.36840	14843.680	284218	284455	9	3022	0.4197479	0.0000000	0.0000000	0.0000000	1.6789916	NaN	NaN	1.000000e+100	0.0004635	TRUE	0.0407129	TRUE	IRX2	NM_001134222 NM_033267 NP_001127694 NP_150366	inside exon	inside	4929	inside exon	0	4	4	3'UTR		5490	3849	0.50	FALSE
229	chr3	54671141	54671460	320		46.38042	14841.736	7094812	7095131	171	7351	0.7034375	0.0000000	0.0000000	0.0000000	2.8137500	NaN	NaN	1.000000e+100	0.0004637	TRUE	0.0407129	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.50	FALSE
230	chr14	93401366	93401625	260		57.01624	14824.223	8680022	8680281	253	12111	1.3838462	0.0000000	0.0000000	0.2330769	5.3023077	NaN	1.000000e+100	1.000000e+100	0.0004648	TRUE	0.0407129	TRUE	CHGA	NM_001275 NP_001266 XM_005267292 XM_006725160 XP_005267349 XP_006725223	inside exon	inside	11921	inside exon	0	7	7	3'UTR		12193	11524	0.50	FALSE
231	chr6	114748691	114749092	402		36.71851	14760.840	11099959	11100360	302	5708	0.6201493	0.0000000	0.0000000	0.0000000	2.4805970	NaN	NaN	1.000000e+100	0.0004718	TRUE	0.0411450	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	85151	NA	NA	NA	5	NA		286790	5588	0.50	FALSE
232	chr1	156641850	156642069	220		66.86782	14710.920	19870849	19871068	536	8487	0.6597727	0.2218182	0.0000000	0.0000000	2.4172727	-1.000000e+100	-1.000000e+100	3.445931e+00	0.0004776	TRUE	0.0413528	TRUE	NES	NM_006617 NP_006608	inside exon	inside	5120	inside exon	0	4	4	inside transcription region		8633	7942	0.50	FALSE
233	chr16	78013224	78013548	325		45.24092	14703.299	10469639	10469963	272	2496	1.0130769	0.0000000	0.1046154	0.4178462	3.5298462	1.000000e+100	1.000000e+100	1.000000e+100	0.0004783	TRUE	0.0413528	TRUE	VAT1L	NM_020927 NP_065978	inside exon	inside	190741	inside exon	0	9	9	3'UTR		191518	189012	0.50	FALSE
234	chr12	10487462	10487578	117		125.30742	14660.968	1855010	1855126	56	1469	1.7461538	0.5709402	0.8683761	0.1333333	5.4119658	6.049804e-01	-2.098302e+00	3.244741e+00	0.0004843	TRUE	0.0416856	TRUE	KLRD1	NM_001114396 NM_002262 NM_007334 NP_001107868 NP_002253 NP_031360 XM_005253363 XM_006719065 XM_006719066 XM_006719067 XM_006719068 XP_005253420 XP_006719128 XP_006719129 XP_006719130 XP_006719131	downstream	downstream	30412	NA	NA	NA	7	NA		12800	6715	0.50	FALSE
235	chr4	187509716	187509925	210		69.73679	14644.725	12659583	12659792	494	1741	0.6869048	0.0000000	0.0000000	0.0000000	2.7476190	NaN	NaN	1.000000e+100	0.0004874	TRUE	0.0416856	TRUE	FAT1	NM_005245 NP_005236 XM_005262834 XM_005262835 XM_006714139 XP_005262891 XP_005262892 XP_006714202	inside exon	inside	135062	inside exon	0	27	27	overlaps 3'UTR		136050	121235	0.50	FALSE
236	chr11	102103810	102104049	240		60.96828	14632.386	10978011	10978250	335	3102	1.3406250	0.4650000	0.0108333	0.4150000	4.4716667	-5.423682e+00	-1.641194e-01	3.265510e+00	0.0004883	TRUE	0.0416856	TRUE	YAP1	NM_001130145 NM_001195044 NM_001195045 NM_001282097 NM_001282098 NM_001282099 NM_001282100 NM_001282101 NM_006106 NP_001123617 NP_001181973 NP_001181974 NP_001269026 NP_001269027 NP_001269028 NP_001269029 NP_001269030 NP_006097 XM_005271378 XM_005271380 XM_005271381 XM_005271383 XP_005271435 XP_005271437 XP_005271438 XP_005271440	inside exon	inside	47061	inside exon	0	6	6	3'UTR		47405	43893	0.50	FALSE
237	chr8	129626267	129626390	124		117.11467	14522.219	9527392	9527515	315	862	0.7423387	0.0000000	0.1629032	0.0000000	2.8064516	1.000000e+100	NaN	1.000000e+100	0.0005021	TRUE	0.0425161	TRUE	MIR1208	NR_031613	NA	NA	0	NA	NA	NA	1	NA		0	0	0.51	FALSE
238	chr13	100616722	100616918	197		73.71076	14521.021	5448440	5448636	191	2995	0.5101523	0.0000000	0.0000000	0.0000000	2.0406091	NaN	NaN	1.000000e+100	0.0005023	TRUE	0.0425161	TRUE	ZIC5	NM_033132 NP_149123	inside exon	inside	7260	inside exon	0	2	2	3'UTR		8903	6298	0.51	FALSE
239	chr10	53799041	53799318	278		52.06027	14472.754	5592092	5592369	138	5761	0.7820144	0.0726619	0.0726619	0.0000000	2.9827338	0.000000e+00	-1.000000e+100	5.359293e+00	0.0005081	TRUE	0.0428305	TRUE	PRKG1	NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029	inside intron	inside	964807	inside intron	14926	6	18	inside transcription region		1223876	1219309	0.51	FALSE
240	chr12	53295648	53295856	209		69.05098	14431.655	6338020	6338228	154	7844	3.4677033	0.9416268	1.8727273	0.4813397	10.5751196	9.919135e-01	-9.680999e-01	3.489375e+00	0.0005145	TRUE	0.0431830	TRUE	KRT8	NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962	inside exon	inside	47794	inside exon	0	3	9	inside transcription region		52679	7553	0.51	FALSE
241	chr12	8948206	8948383	178		80.96385	14411.565	1368060	1368237	52	8328	1.0963483	0.0000000	0.0000000	0.0000000	4.3853933	NaN	NaN	1.000000e+100	0.0005175	TRUE	0.0432615	TRUE	RIMKLB	NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191	NA	NA	0	NA	NA	NA	9	NA		0	0	0.51	FALSE
242	chr8	41122804	41123008	205		70.20977	14393.003	3333326	3333530	129	3517	1.0956098	0.0000000	0.0000000	0.0000000	4.3824390	NaN	NaN	1.000000e+100	0.0005198	TRUE	0.0432718	TRUE	SFRP1	NM_003012 NP_003003	inside exon	inside	43982	inside exon	0	3	3	inside transcription region		47514	43992	0.51	FALSE
243	chrX	5808744	5809081	338		42.51242	14369.196	648510	648847	19	2072	0.6162722	0.0508876	0.1502959	0.0597633	2.2041420	1.562420e+00	2.319467e-01	5.436760e+00	0.0005224	TRUE	0.0433089	TRUE	NLGN4X	NM_001282145 NM_001282146 NM_020742 NM_181332 NP_001269074 NP_001269075 NP_065793 NP_851849 XM_005274564 XM_005274565 XM_005274566 XM_005274568 XM_006724504 XP_005274621 XP_005274622 XP_005274623 XP_005274625 XP_006724567	inside exon	inside	337625	inside exon	0	7	7	3'UTR		338623	258649	0.51	FALSE
244	chr5	141693647	141693806	160		89.11364	14258.183	12326074	12326233	384	14439	0.6993750	0.0000000	0.0000000	0.0000000	2.7975000	NaN	NaN	1.000000e+100	0.0005390	TRUE	0.0444974	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	10814	inside exon	0	3	3	overlaps 3'UTR		14628	5556	0.51	FALSE
245	chr6	121756811	121756978	168		84.62158	14216.426	11635099	11635266	324	168	2.4556548	0.6083333	0.0000000	0.0000000	9.2142857	-1.000000e+100	-1.000000e+100	3.920938e+00	0.0005443	TRUE	0.0447560	TRUE	GJA1	NM_000165 NP_000156	inside exon	inside	66	inside exon	0	1	2	5' UTR		14128	1148	0.51	FALSE
246	chr6	114747247	114747401	155		91.47193	14178.149	11098656	11098810	302	5708	1.3129032	0.0000000	0.0000000	0.0000000	5.2516129	NaN	NaN	1.000000e+100	0.0005505	TRUE	0.0450788	TRUE	HS3ST5	NM_153612 NP_705840 XM_006715379 XP_006715442	upstream	upstream	83707	NA	NA	NA	5	NA		286790	5588	0.51	FALSE
247	chr3	109045220	109045656	437		32.27994	14106.336	10141701	10142137	311	11345	8.0924485	3.5208238	2.8970252	4.0878719	21.8640732	-2.813408e-01	2.154369e-01	2.634577e+00	0.0005615	TRUE	0.0452911	TRUE	DPPA4	NM_018189 NP_060659	inside exon	inside	10763	inside exon	0	6	6	3'UTR		11431	8594	0.51	FALSE
248	chr1	156642819	156642997	179		78.76910	14099.669	19871632	19871810	536	8487	0.6022346	0.3318436	0.0000000	0.0000000	2.0770950	-1.000000e+100	-1.000000e+100	2.645992e+00	0.0005623	TRUE	0.0452911	TRUE	NES	NM_006617 NP_006608	inside exon	inside	4192	inside exon	0	4	4	inside transcription region		8633	7942	0.51	FALSE
249	chr3	54667941	54668161	221		63.76629	14092.350	7092251	7092471	171	7351	0.6542986	0.0000000	0.0000000	0.0000000	2.6171946	NaN	NaN	1.000000e+100	0.0005633	TRUE	0.0452911	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.51	FALSE
250	chr17	47133250	47133444	195		72.23499	14085.823	9737675	9737869	231	18864	1.2092308	0.0000000	0.0000000	0.0000000	4.8369231	NaN	NaN	1.000000e+100	0.0005644	TRUE	0.0452911	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	58476	inside exon	0	13	13	3'UTR		58733	51698	0.51	FALSE
251	chr2	67566158	67566385	228		61.69828	14067.208	7344777	7345004	170	8050	0.5574561	0.0000000	0.0000000	0.0000000	2.2298246	NaN	NaN	1.000000e+100	0.0005675	TRUE	0.0452911	TRUE	ETAA1	NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435	upstream	upstream	58057	NA	NA	NA	6	NA		13091	12589	0.51	FALSE
252	chr1	55529702	55529973	272		51.70488	14063.727	9839389	9839660	252	890	0.8104779	0.0000000	0.0000000	0.0000000	3.2419118	NaN	NaN	1.000000e+100	0.0005685	TRUE	0.0452911	TRUE	PCSK9	NM_174936 NP_777596 NR_110451	NA	NA	0	NA	NA	NA	10	NA		0	0	0.51	FALSE
253	chr14	74825178	74825332	155		90.70896	14059.890	6617239	6617393	201	3221	0.8516129	0.0000000	0.0000000	0.0000000	3.4064516	NaN	NaN	1.000000e+100	0.0005688	TRUE	0.0452911	TRUE	VRTN	NM_018228 NP_060698	inside exon	inside	10012	inside exon	0	2	2	inside transcription region		11545	2108	0.51	FALSE
254	chr12	8940747	8940924	178		78.74957	14017.424	1366451	1366628	52	8328	1.1064607	0.0000000	0.0000000	0.0000000	4.4258427	NaN	NaN	1.000000e+100	0.0005776	TRUE	0.0458075	TRUE	RIMKLB	NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191	NA	NA	0	NA	NA	NA	9	NA		0	0	0.51	FALSE
255	chr15	65623772	65623997	226		61.89960	13989.310	5965710	5965935	184	8664	0.5117257	0.0000000	0.0000000	0.0000000	2.0469027	NaN	NaN	1.000000e+100	0.0005855	TRUE	0.0462558	TRUE	IGDCC3	NM_004884 NP_004875	inside exon	inside	24713	inside exon	0	7	12	inside transcription region		26982	6564	0.51	FALSE
256	chr4	93523391	93523525	135		103.47669	13969.354	7118237	7118371	252	3836	0.6340741	0.0000000	0.0000000	0.0000000	2.5362963	NaN	NaN	1.000000e+100	0.0005883	TRUE	0.0462646	TRUE	GRID2	NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258	inside intron	inside	297841	inside intron	-11954	2	15	inside transcription region		1468099	1467841	0.51	FALSE
257	chr7	136935977	136936138	162		86.18204	13961.491	13939968	13940129	385	3745	2.4040123	0.6160494	0.4370370	0.0000000	8.5629630	-4.952905e-01	-1.000000e+100	3.796992e+00	0.0005902	TRUE	0.0462646	TRUE	PTN	NM_002825 NP_002816 XM_005250515 XM_005250516 XP_005250572 XP_005250573	inside exon	inside	92408	inside exon	0	4	5	inside transcription region		116454	26953	0.51	FALSE
258	chr7	83090259	83090482	224		62.18237	13928.851	8279763	8279986	218	5588	0.5520089	0.0000000	0.0000000	0.0000000	2.2080357	NaN	NaN	1.000000e+100	0.0005964	TRUE	0.0465666	TRUE	SEMA3E	NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250	inside intron	inside	187997	inside intron	-5316	4	17	inside transcription region		285257	280956	0.51	FALSE
259	chr15	77907148	77907321	174		79.92182	13906.396	7909674	7909847	231	2856	0.6491379	0.0000000	0.0000000	0.0000000	2.5965517	NaN	NaN	1.000000e+100	0.0005998	TRUE	0.0466073	TRUE	LINGO1	NM_032808 NP_116197 XM_006720723 XP_006720786	inside exon	inside	81154	inside exon	0	4	4	inside transcription region		83106	1844	0.51	FALSE
260	chr13	100616157	100616400	244		56.89263	13881.801	5448092	5448335	191	2995	0.5706967	0.0000000	0.0000000	0.0000000	2.2827869	NaN	NaN	1.000000e+100	0.0006035	TRUE	0.0466073	TRUE	ZIC5	NM_033132 NP_149123	inside exon	inside	7778	inside exon	0	2	2	3'UTR		8903	6298	0.51	FALSE
261	chr5	146773235	146773515	281		49.39740	13880.670	12807921	12808201	394	10875	1.6119217	0.8946619	0.3765125	0.2042705	4.9722420	-1.248645e+00	-2.130862e+00	2.474482e+00	0.0006038	TRUE	0.0466073	TRUE	DPYSL3	NM_001197294 NM_001387 NP_001184223 NP_001378	inside exon	inside	116104	inside exon	0	14	14	3'UTR		119248	115823	0.51	FALSE
262	chr5	115781504	115781860	357		38.64011	13794.520	9459227	9459583	285	3139	1.7344538	0.0100840	0.1854342	0.1210084	6.6212885	4.200762e+00	3.584963e+00	9.358895e+00	0.0006180	TRUE	0.0475012	TRUE	SEMA6A	NM_020796 NP_065847 XM_005272041 XM_005272042 XM_006714663 XP_005272098 XP_005272099 XP_006714726	inside exon	inside	128691	inside exon	0	19	19	3'UTR		131300	58331	0.51	FALSE
263	chr17	42876603	42876832	230		59.86767	13769.564	8247212	8247441	204	7091	0.7058696	0.0000000	0.0000000	0.0000000	2.8234783	NaN	NaN	1.000000e+100	0.0006223	TRUE	0.0475012	TRUE	GJC1	NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978	inside exon	inside	31347	inside exon	0	3	3	3'UTR		32363	1190	0.51	FALSE
264	chr18	2847017	2847199	183		75.23921	13768.776	268805	268987	7	183	13.0281421	47.3650273	1.2699454	3.0732240	0.4043716	-5.220984e+00	-3.945997e+00	-6.871997e+00	0.0006225	TRUE	0.0475012	TRUE	EMILIN2	NM_032048 NP_114437	overlaps 5'	overlaps 5'	0	inside exon	0	1	8	overlaps 5' UTR		67062	66215	0.51	FALSE
265	chrX	113705687	113705910	224		61.33788	13739.686	6942206	6942429	299	5443	1.0026786	0.0607143	0.0133929	0.0285714	3.9080357	-2.180572e+00	-1.087463e+00	6.008264e+00	0.0006274	TRUE	0.0476919	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	upstream	upstream	112641	NA	NA	NA	6	NA		326073	180632	0.51	FALSE
266	chr7	121659184	121659322	139		98.75317	13726.691	12249031	12249169	331	145	0.7546763	0.0000000	0.0000000	0.0000000	3.0187050	NaN	NaN	1.000000e+100	0.0006301	TRUE	0.0477214	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside exon	inside	146025	inside exon	0	13	30	inside transcription region		188931	187720	0.51	FALSE
267	chr16	65266048	65266237	190		72.16268	13710.909	8196507	8196696	214	5478	0.6100000	0.0000000	0.0000000	0.0000000	2.4400000	NaN	NaN	1.000000e+100	0.0006327	TRUE	0.0477385	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.51	FALSE
268	chr5	141692507	141692741	235		57.99894	13629.750	12325645	12325879	384	14439	0.6455319	0.0000000	0.0000000	0.0595745	2.5225532	NaN	1.000000e+100	1.000000e+100	0.0006457	TRUE	0.0485358	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	11879	inside exon	0	3	3	3'UTR		14628	5556	0.51	FALSE
269	chr2	77325596	77325801	206		66.01103	13598.272	8970769	8970974	213	11162	0.7592233	0.0000000	0.0000000	0.0000000	3.0368932	NaN	NaN	1.000000e+100	0.0006517	TRUE	0.0487089	TRUE	LRRTM4	NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269	inside intron	inside	423701	inside intron	349554	4	4	inside transcription region		774652	772976	0.51	FALSE
270	chr21	44475285	44475414	130		104.54845	13591.298	2430269	2430398	56	13860	0.5288462	0.0000000	0.1230769	0.0000000	1.9923077	1.000000e+100	NaN	1.000000e+100	0.0006528	TRUE	0.0487089	TRUE	CBS	NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120	inside intron	inside	21058	inside intron	1192	17	18	inside transcription region		23171	18313	0.51	FALSE
271	chr1	232272252	232272435	184		73.71276	13563.148	27624464	27624647	784	3355	0.5459239	0.0173913	0.0000000	0.0000000	2.1663043	-1.000000e+100	-1.000000e+100	6.960726e+00	0.0006569	TRUE	0.0488192	TRUE	TSNAX-DISC1	NR_028393 NR_028394 NR_028395 NR_028396 NR_028397 NR_028398 NR_028399 NR_028400	NA	NA	0	NA	NA	NA	16	NA		0	0	0.51	FALSE
272	chr1	156641604	156641829	226		59.96115	13551.220	19870623	19870848	536	8487	0.9982301	0.2159292	0.0000000	0.0000000	3.7769912	-1.000000e+100	-1.000000e+100	4.128607e+00	0.0006592	TRUE	0.0488192	TRUE	NES	NM_006617 NP_006608	inside exon	inside	5360	inside exon	0	4	4	inside transcription region		8633	7942	0.51	FALSE
273	chr7	121693964	121694092	129		104.69905	13506.178	12250479	12250607	333	3660	1.2941860	0.0000000	0.0000000	0.0000000	5.1767442	NaN	NaN	1.000000e+100	0.0006647	TRUE	0.0490474	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside exon	inside	180805	inside exon	0	26	30	inside transcription region		188931	187720	0.52	FALSE
274	chr20	57415778	57415936	159		84.60402	13452.039	6588175	6588333	175	734	0.8745283	0.0000000	0.0000000	0.0000000	3.4981132	NaN	NaN	1.000000e+100	0.0006752	TRUE	0.0496436	TRUE	GNAS	NM_000516 NM_001077488 NM_001077489 NM_001077490 NM_016592 NM_080425 NM_080426 NP_000507 NP_001070956 NP_001070957 NP_001070958 NP_057676 NP_536350 NP_536351 NR_003259 XM_005260401 XM_005260402 XM_006723781 XM_006723782 XP_005260458 XP_005260459 XP_006723844 XP_006723845	inside exon	inside	983	inside exon	0	1	13	overlaps 3'UTR		71455	737	0.52	FALSE
275	chr12	8946903	8947094	192		69.96853	13433.958	1367082	1367273	52	8328	0.9208333	0.0000000	0.0000000	0.0000000	3.6833333	NaN	NaN	1.000000e+100	0.0006793	TRUE	0.0497602	TRUE	RIMKLB	NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191	NA	NA	0	NA	NA	NA	9	NA		0	0	0.52	FALSE
276	chr11	67393572	67393820	249		53.87062	13413.784	7449359	7449607	230	770	1.5281124	0.0947791	0.5429719	0.6032129	4.8714859	2.518236e+00	2.670026e+00	5.683649e+00	0.0006820	TRUE	0.0497812	TRUE	NUDT8	NM_001243750 NM_181843 NP_001230679 NP_862826	downstream	downstream	3588	NA	NA	NA	3	NA		1999	1606	0.52	FALSE
277	chr19	54446502	54446666	165		80.96374	13359.017	11721726	11721890	396	1943	1.2087879	0.0000000	0.0000000	0.0000000	4.8351515	NaN	NaN	1.000000e+100	0.0006939	TRUE	0.0504626	TRUE	CACNG7	NM_031896 NP_114102 XM_005259124 XM_005259125 XP_005259181 XP_005259182	inside exon	inside	30511	inside exon	0	5	5	3'UTR		30978	29461	0.52	FALSE
278	chr12	86268093	86268254	162		81.84097	13258.237	9619324	9619485	270	4255	0.8382716	0.0382716	0.0864198	0.0000000	3.2283951	1.175087e+00	-1.000000e+100	6.398399e+00	0.0007161	TRUE	0.0518915	TRUE	NTS	NM_006183 NP_006174	inside exon	inside	20	inside exon	0	1	4	overlaps 5' UTR		8697	7971	0.52	FALSE
279	chr7	121652529	121652701	173		75.87908	13127.080	12248238	12248410	330	3506	0.6904624	0.0000000	0.0000000	0.0000000	2.7618497	NaN	NaN	1.000000e+100	0.0007425	TRUE	0.0536147	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside intron	inside	139370	inside intron	-1166	12	30	inside transcription region		188931	187720	0.52	FALSE
280	chr4	180090389	180090809	421		31.04512	13069.995	12309683	12310103	468	3689	0.4768409	0.0000000	0.0000000	0.0000000	1.9073634	NaN	NaN	1.000000e+100	0.0007552	TRUE	0.0543335	TRUE	LINC01098	NM_001085490 NR_028342	NA	NA	0	NA	NA	NA	6	NA		0	0	0.52	FALSE
281	chr12	59717346	59717508	163		79.97842	13036.483	7619580	7619742	197	6694	1.9490798	0.0000000	0.0110429	0.0196319	7.7656442	1.000000e+100	1.000000e+100	1.000000e+100	0.0007620	TRUE	0.0546286	TRUE	SLC16A7	NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756	upstream	upstream	272313	NA	NA	NA	6	NA		193814	74877	0.52	FALSE
282	chr18	6948402	6948555	154		84.40969	12999.092	515360	515513	17	3800	0.8188312	0.0000000	0.0000000	0.0000000	3.2753247	NaN	NaN	1.000000e+100	0.0007700	TRUE	0.0550027	TRUE	LAMA1	NM_005559 NP_005550	inside exon	inside	169258	inside exon	0	59	62	inside transcription region		176070	95663	0.52	FALSE
283	chr13	56154834	56155008	175		73.84728	12923.274	3926105	3926279	121	13379	1.0980000	0.0000000	0.0000000	0.0000000	4.3920000	NaN	NaN	1.000000e+100	0.0007865	TRUE	0.0559862	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.52	FALSE
284	chr13	51748705	51748920	216		59.62432	12878.853	3598442	3598657	92	10662	10.1291667	0.0787037	0.5648148	0.7305556	39.1425926	2.843275e+00	3.214491e+00	8.958092e+00	0.0007969	TRUE	0.0563386	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.53	FALSE
285	chr12	66359712	66359973	262		49.14917	12877.081	8152394	8152655	215	2964	1.0416031	0.0000000	0.0000000	0.2931298	3.8732824	NaN	1.000000e+100	1.000000e+100	0.0007970	TRUE	0.0563386	TRUE	HMGA2	NM_001015886 NM_003483 NM_003484 NP_003474 NP_003475 XM_005269164 XM_006719620 XP_005269221 XP_006719683 XR_245958	inside exon	inside	141472	inside exon	0	5	5	3'UTR		141831	138021	0.53	FALSE
286	chr2	17773337	17773503	167		76.94006	12848.989	1048534	1048700	41	167	0.7565868	0.0000000	0.0000000	0.0000000	3.0263473	NaN	NaN	1.000000e+100	0.0008042	TRUE	0.0566443	TRUE	VSNL1	NM_003385 NP_003376	inside exon	inside	51530	inside exon	0	2	4	overlaps 5' UTR		115899	63319	0.53	FALSE
287	chr12	14859136	14859397	262		48.54584	12719.009	2666269	2666530	70	3841	1.0646947	0.0000000	0.1595420	0.1541985	3.9450382	1.000000e+100	1.000000e+100	1.000000e+100	0.0008371	TRUE	0.0587584	TRUE	GUCY2C	NM_004963 NP_004954	upstream	upstream	9617	NA	NA	NA	27	NA		83951	83331	0.53	FALSE
288	chr4	189012451	189012600	150		84.61877	12692.815	12667880	12668029	498	639	0.5713333	0.0000000	0.0000000	0.0000000	2.2853333	NaN	NaN	1.000000e+100	0.0008444	TRUE	0.0590649	TRUE	TRIML2	NM_173553 NP_775824 XM_006714136 XP_006714199	inside exon	inside	14144	inside exon	0	8	8	overlaps 3'UTR		14317	13995	0.53	FALSE
289	chr13	43441277	43441413	137		92.53736	12677.619	2381221	2381357	57	13438	0.7704380	0.0000000	0.0000000	0.0000000	3.0817518	NaN	NaN	1.000000e+100	0.0008480	TRUE	0.0591093	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	124994	NA	NA	NA	13	NA		105883	103915	0.53	FALSE
290	chr13	53313765	53313952	188		67.18674	12631.108	3909431	3909618	108	787	0.7973404	0.0000000	0.0000000	0.0000000	3.1893617	NaN	NaN	1.000000e+100	0.0008601	TRUE	0.0597506	TRUE	LECT1	NM_001011705 NM_007015 NP_001011705 NP_008946 XM_006719760 XM_006719761 XP_006719823 XP_006719824	overlaps 5'	overlaps 5'	0	inside exon	0	1	6	overlaps 5' UTR		36547	36187	0.53	FALSE
291	chr13	51748306	51748477	172		73.15402	12582.492	3598043	3598214	92	10662	5.5014535	0.1941860	0.0000000	0.0000000	21.8116279	-1.000000e+100	-1.000000e+100	6.811514e+00	0.0008723	TRUE	0.0599786	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.53	FALSE
292	chr1	156043299	156043390	92		136.61987	12569.028	19697588	19697679	529	5488	0.7407609	0.0000000	0.1956522	0.0000000	2.7673913	1.000000e+100	NaN	1.000000e+100	0.0008756	TRUE	0.0599786	TRUE	MEX3A	NM_001093725 NP_001087194	inside exon	inside	8399	inside exon	0	2	2	3'UTR		9985	5424	0.53	FALSE
293	chr13	43439099	43439345	247		50.88533	12568.675	2379368	2379614	57	13438	0.6722672	0.0000000	0.1894737	0.0000000	2.4995951	1.000000e+100	NaN	1.000000e+100	0.0008759	TRUE	0.0599786	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	127062	NA	NA	NA	13	NA		105883	103915	0.53	FALSE
294	chrX	113704580	113704803	224		56.10468	12567.448	6941381	6941604	299	5443	1.6988839	0.1821429	0.0660714	0.6616071	5.8857143	-1.462972e+00	1.860904e+00	5.014075e+00	0.0008765	TRUE	0.0599786	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	upstream	upstream	113748	NA	NA	NA	6	NA		326073	180632	0.53	FALSE
295	chr7	121678809	121678943	135		93.04038	12560.451	12249609	12249743	332	16420	0.7018519	0.0000000	0.0000000	0.0000000	2.8074074	NaN	NaN	1.000000e+100	0.0008783	TRUE	0.0599786	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside exon	inside	165650	inside exon	0	19	30	inside transcription region		188931	187720	0.53	FALSE
296	chr9	133995622	133995908	287		43.70841	12544.314	11058938	11059224	391	5341	0.9729965	0.0571429	0.2850174	0.2738676	3.2759582	2.318405e+00	2.260833e+00	5.841200e+00	0.0008824	TRUE	0.0600519	TRUE	AIF1L	NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701	inside exon	inside	17432	inside exon	0	5	5	overlaps 3'UTR		20349	17441	0.53	FALSE
297	chr1	229313094	229313237	144		86.83781	12504.644	27202907	27203050	774	5305	1.5163194	0.1402778	0.5625000	0.0833333	5.2791667	2.003567e+00	-7.513209e-01	5.233952e+00	0.0008911	TRUE	0.0604439	TRUE	RAB4A	NM_001271998 NM_004578 NP_001258927 NP_004569 NR_073545	upstream	upstream	93572	NA	NA	NA	8	NA		34831	31637	0.53	FALSE
298	chr13	47407393	47407432	40		311.97601	12479.040	2833102	2833141	68	85	0.4700000	0.0000000	0.0000000	0.0000000	1.8800000	NaN	NaN	1.000000e+100	0.0008976	TRUE	0.0606797	TRUE	HTR2A	NM_000621 NM_001165947 NP_000612 NP_001159419	inside exon	inside	63779	inside exon	0	4	4	3'UTR		65534	61069	0.53	FALSE
299	chr6	3227721	3227876	156		79.67205	12428.840	465942	466097	12	3330	5.6817308	0.0000000	0.0000000	0.0000000	22.7269231	NaN	NaN	1.000000e+100	0.0009108	TRUE	0.0613620	TRUE	TUBB2B	NM_178012 NP_821080	inside exon	inside	92	inside exon	0	1	4	overlaps 5' UTR		3473	2792	0.53	FALSE
300	chr12	86276001	86276213	213		58.04080	12362.691	9619773	9619985	271	239	0.8685446	0.0000000	0.0000000	0.0000000	3.4741784	NaN	NaN	1.000000e+100	0.0009299	TRUE	0.0622679	TRUE	NTS	NM_006183 NP_006174	inside exon	inside	7928	inside exon	0	4	4	overlaps 3'UTR		8697	7971	0.53	FALSE
301	chr20	31375036	31375257	222		55.67403	12359.635	2805961	2806182	85	24597	2.8112613	1.1279279	1.4270270	0.5702703	8.1198198	3.393378e-01	-9.839572e-01	2.847773e+00	0.0009304	TRUE	0.0622679	TRUE	DNMT3B	NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046	inside exon	inside	7378	inside exon	0	6	22	inside transcription region		29504	27787	0.53	FALSE
302	chr9	133996141	133996443	303		40.62145	12308.298	11059455	11059757	391	5341	0.9429043	0.1689769	0.0000000	0.0000000	3.6026403	-1.000000e+100	-1.000000e+100	4.414157e+00	0.0009448	TRUE	0.0630248	TRUE	AIF1L	NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701	inside exon	inside	17951	inside exon	0	5	5	3'UTR		20349	17441	0.53	FALSE
303	chr12	53292463	53292683	221		55.59369	12286.206	6337351	6337571	154	7844	4.1730769	1.3312217	1.0687783	0.5221719	13.7701357	-3.167883e-01	-1.350154e+00	3.370720e+00	0.0009499	TRUE	0.0630724	TRUE	KRT8	NM_001256282 NM_001256293 NM_002273 NP_001243211 NP_001243222 NP_002264 NR_045962	inside exon	inside	50967	inside exon	0	7	9	inside transcription region		52679	7553	0.53	FALSE
304	chr5	146772928	146773166	239		51.36963	12277.341	12807614	12807852	394	10875	2.1290795	0.6928870	0.0000000	0.0000000	7.8234310	-1.000000e+100	-1.000000e+100	3.497109e+00	0.0009518	TRUE	0.0630724	TRUE	DPYSL3	NM_001197294 NM_001387 NP_001184223 NP_001378	inside exon	inside	116453	inside exon	0	14	14	3'UTR		119248	115823	0.53	FALSE
305	chr3	46620722	46620856	135		90.79084	12256.763	5013611	5013745	116	4837	1.3688889	0.0000000	0.0000000	0.0000000	5.4755556	NaN	NaN	1.000000e+100	0.0009596	TRUE	0.0633799	TRUE	LRRC2	NM_024512 NM_024750 NP_078788 XM_006713332 XP_006713395	inside intron	inside	716	inside intron	-571	1	9	5' UTR		64694	32577	0.53	FALSE
306	chr15	43991172	43991384	213		57.39620	12225.391	2727870	2728082	83	5230	1.9591549	0.2957746	0.1464789	0.3286385	7.0657277	-1.013806e+00	1.520031e-01	4.578268e+00	0.0009690	TRUE	0.0635843	TRUE	CKMT1A	NM_001015001 NP_001015001 XM_005254498 XP_005254555	inside exon	inside	6088	inside exon	0	10	10	overlaps 3'UTR		6336	5038	0.53	FALSE
307	chr2	202898668	202898867	200		61.12662	12225.324	19693710	19693909	532	4463	0.7702500	0.4080000	0.0000000	0.2020000	2.4710000	-1.000000e+100	-1.014214e+00	2.598454e+00	0.0009690	TRUE	0.0635843	TRUE	FZD7	NM_003507 NP_003498	promoter	promoter	443	NA	NA	NA	1	NA		3850	1724	0.53	FALSE
308	chr1	82457605	82457805	201		60.67160	12194.992	11406029	11406229	322	1848	0.4477612	0.0000000	0.0000000	0.0000000	1.7910448	NaN	NaN	1.000000e+100	0.0009779	TRUE	0.0639614	TRUE	LPHN2	NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560	inside exon	inside	41732	inside exon	0	17	17	3'UTR		42234	40867	0.53	FALSE
309	chr11	3431771	3432069	299		40.68563	12165.004	719880	720178	13	10349	0.8443144	0.0000000	0.0000000	0.0000000	3.3772575	NaN	NaN	1.000000e+100	0.0009864	TRUE	0.0640359	TRUE	LOC650368	NR_024248	NA	NA	0	NA	NA	NA	9	NA		0	0	0.53	FALSE
310	chr5	120035002	120035145	144		84.42559	12157.285	9720549	9720692	300	4047	1.0361111	0.0000000	0.0000000	0.0000000	4.1444444	NaN	NaN	1.000000e+100	0.0009889	TRUE	0.0640359	TRUE	PRR16	NM_016644 NP_057728 XM_005272010 XM_005272011 XM_005272012 XP_005272067 XP_005272068 XP_005272069	downstream	downstream	234983	NA	NA	NA	3	NA		222945	205505	0.53	FALSE
311	chr13	43445854	43446020	167		72.73330	12146.461	2384811	2384977	57	13438	0.7407186	0.0000000	0.0000000	0.0000000	2.9628743	NaN	NaN	1.000000e+100	0.0009920	TRUE	0.0640359	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	120387	NA	NA	NA	13	NA		105883	103915	0.53	FALSE
312	chr5	25432487	25432739	253		48.00623	12145.576	1096404	1096656	57	15439	0.3626482	0.0000000	0.0000000	0.0000000	1.4505929	NaN	NaN	1.000000e+100	0.0009924	TRUE	0.0640359	TRUE	RP11-730N24.1	NR_037896	NA	NA	0	NA	NA	NA	3	NA		0	0	0.53	FALSE
313	chr1	223197782	223197919	138		87.95062	12137.185	26366505	26366642	754	8216	4.5677536	0.0000000	0.0000000	0.0000000	18.2710145	NaN	NaN	1.000000e+100	0.0009949	TRUE	0.0640359	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	209351	NA	NA	NA	10	NA		190906	63148	0.53	FALSE
314	chr1	223202909	223203124	216		56.02248	12100.856	26370672	26370887	754	8216	0.6960648	0.0000000	0.1777778	0.0000000	2.6064815	1.000000e+100	NaN	1.000000e+100	0.0010052	TRUE	0.0644876	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	214478	NA	NA	NA	10	NA		190906	63148	0.53	FALSE
315	chr2	241700646	241700780	135		89.34649	12061.777	23645970	23646104	637	15221	0.7051852	0.0000000	0.0000000	0.0000000	2.8207407	NaN	NaN	1.000000e+100	0.0010154	TRUE	0.0649365	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	58945	inside exon	0	24	43	inside transcription region		96895	74339	0.53	FALSE
316	chr5	146775122	146775284	163		73.46985	11975.586	12808373	12808535	394	10875	1.1914110	0.3116564	0.1668712	0.0969325	4.1901840	-9.012218e-01	-1.684904e+00	3.748985e+00	0.0010435	TRUE	0.0663012	TRUE	DPYSL3	NM_001197294 NM_001387 NP_001184223 NP_001378	inside exon	inside	114335	inside exon	0	13	14	inside transcription region		119248	115823	0.54	FALSE
317	chr15	65621728	65621935	208		57.56005	11972.490	5964972	5965179	184	8664	0.8081731	0.0375000	0.0000000	0.0000000	3.1951923	-1.000000e+100	-1.000000e+100	6.412868e+00	0.0010446	TRUE	0.0663012	TRUE	IGDCC3	NM_004884 NP_004875	inside exon	inside	26775	inside exon	0	12	12	inside transcription region		26982	6564	0.54	FALSE
318	chr3	65339308	65339488	181		65.99150	11944.462	7961601	7961781	214	3821	0.6635359	0.0000000	0.1116022	0.0000000	2.5425414	1.000000e+100	NaN	1.000000e+100	0.0010514	TRUE	0.0663012	TRUE	MAGI1	NM_001033057 NM_004742 NM_015520 NP_001028229 NP_004733 NP_056335 XM_005265563 XM_005265564 XM_005265565 XM_005265566 XM_005265568 XM_005265570 XM_005265571 XM_005265574 XM_006713407 XM_006713408 XM_006713409 XM_006713410 XM_006713411 XM_006713412 XM_006713413 XM_006713414 XP_005265620 XP_005265621 XP_005265622 XP_005265623 XP_005265625 XP_005265627 XP_005265628 XP_005265631 XP_006713470 XP_006713471 XP_006713472 XP_006713473 XP_006713474 XP_006713475 XP_006713476 XP_006713477	downstream	downstream	685021	NA	NA	NA	25	NA		684603	681232	0.54	FALSE
319	chr5	141690887	141691067	181		65.95700	11938.217	12324462	12324642	384	14439	0.5596685	0.0000000	0.0000000	0.1381215	2.1005525	NaN	1.000000e+100	1.000000e+100	0.0010532	TRUE	0.0663012	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	13553	inside exon	0	3	3	3'UTR		14628	5556	0.54	FALSE
320	chr7	121680870	121681031	162		73.69138	11938.004	12249879	12250040	332	16420	0.6055556	0.0000000	0.0000000	0.0000000	2.4222222	NaN	NaN	1.000000e+100	0.0010532	TRUE	0.0663012	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside exon	inside	167711	inside exon	0	21	30	inside transcription region		188931	187720	0.54	FALSE
321	chr9	133995938	133996104	167		71.39268	11922.577	11059254	11059420	391	5341	1.5502994	0.0000000	0.3580838	0.0646707	5.7784431	1.000000e+100	1.000000e+100	1.000000e+100	0.0010582	TRUE	0.0664103	TRUE	AIF1L	NM_001002260 NM_001185095 NM_001185096 NM_031426 NP_001172024 NP_001172025 NP_113614 NR_033701	inside exon	inside	17748	inside exon	0	5	5	3'UTR		20349	17441	0.54	FALSE
322	chrX	110790978	110791163	186		63.96994	11898.408	6862622	6862807	294	1078	2.5661290	0.8333333	0.6698925	0.5752688	8.1860215	-3.149641e-01	-5.346574e-01	3.296197e+00	0.0010634	TRUE	0.0665288	TRUE	LINC00890	NR_033974	NA	NA	0	NA	NA	NA	3	NA		0	0	0.54	FALSE
323	chr16	78013754	78013989	236		50.21285	11850.232	10470155	10470390	272	2496	0.6701271	0.0000000	0.1381356	0.0000000	2.5423729	1.000000e+100	NaN	1.000000e+100	0.0010777	TRUE	0.0668706	TRUE	VAT1L	NM_020927 NP_065978	inside exon	inside	191271	inside exon	0	9	9	3'UTR		191518	189012	0.54	FALSE
324	chr16	3142137	3142352	216		54.74980	11825.957	1055654	1055869	35	10352	1.1351852	0.0046296	0.0000000	0.1870370	4.3490741	-1.000000e+100	5.336283e+00	9.875596e+00	0.0010847	TRUE	0.0668706	TRUE	ZSCAN10	NM_001282415 NM_001282416 NM_032805 NP_001269344 NP_001269345 NP_116194	overlaps exon upstream	inside	6941	overlaps exon upstream	0	2	5	5' UTR		10398	1160	0.54	FALSE
325	chr6	3226393	3226503	111		106.51895	11823.604	465722	465832	12	3330	5.5680180	0.0036036	0.0018018	0.0000000	22.2666667	-1.000000e+00	-1.000000e+100	1.259316e+01	0.0010853	TRUE	0.0668706	TRUE	TUBB2B	NM_178012 NP_821080	inside exon	inside	1465	inside exon	0	3	4	inside transcription region		3473	2792	0.54	FALSE
326	chr4	41259626	41259754	129		91.65489	11823.481	3752998	3753126	117	11482	4.6410853	1.3550388	0.2155039	0.1162791	16.8775194	-2.652548e+00	-3.542671e+00	3.638697e+00	0.0010853	TRUE	0.0668706	TRUE	UCHL1	NM_004181 NP_004172	inside exon	inside	728	inside exon	0	2	8	5' UTR		11548	7357	0.54	FALSE
327	chr2	27172426	27172660	235		50.31005	11822.862	2271565	2271799	64	5028	0.6310638	0.0621277	0.0000000	0.0000000	2.4621277	-1.000000e+100	-1.000000e+100	5.308526e+00	0.0010855	TRUE	0.0668706	TRUE	DPYSL5	NM_001253723 NM_001253724 NM_020134 NP_001240652 NP_001240653 NP_064519	inside exon	inside	101134	inside exon	0	13	13	3'UTR		101927	48495	0.54	FALSE
328	chr4	62616011	62616318	308		38.32626	11804.490	4881892	4882199	152	3983	1.0715909	0.0000000	0.0000000	0.0000000	4.2863636	NaN	NaN	1.000000e+100	0.0010916	TRUE	0.0670454	TRUE	LPHN3	NM_015236 NP_056051 XM_006714153 XM_006714154 XM_006714155 XM_006714156 XP_006714216 XP_006714217 XP_006714218 XP_006714219	inside intron	inside	17539	inside intron	-16739	1	6	inside transcription region		202269	202149	0.54	FALSE
329	chr14	41989592	41989727	136		86.16566	11718.530	2092692	2092827	94	1895	1.0948529	0.0000000	0.0000000	0.0000000	4.3794118	NaN	NaN	1.000000e+100	0.0011190	TRUE	0.0685202	TRUE	LRFN5	NM_152447 NP_689660 XM_005267369 XP_005267426 XR_429293	upstream	upstream	87037	NA	NA	NA	6	NA		296988	17549	0.55	FALSE
330	chr16	49669905	49670038	134		87.20490	11685.457	7114628	7114761	168	2767	0.7563433	0.0000000	0.0000000	0.0000000	3.0253731	NaN	NaN	1.000000e+100	0.0011301	TRUE	0.0689859	TRUE	ZNF423	NM_001271620 NM_015069 NP_001258549 NP_055884 XM_005255855 XM_005255856 XM_005255857 XM_006721171 XP_005255912 XP_005255913 XP_005255914 XP_006721234	inside exon	inside	221792	inside exon	0	4	8	inside transcription region		367315	239592	0.55	FALSE
331	chr14	57267782	57267913	132		88.38140	11666.345	3575608	3575739	149	4503	0.6284091	0.0000000	0.0000000	0.0000000	2.5136364	NaN	NaN	1.000000e+100	0.0011359	TRUE	0.0691329	TRUE	OTX2	NM_001270523 NM_001270524 NM_001270525 NM_021728 NM_172337 NP_001257452 NP_001257453 NP_001257454 NP_068374 NP_758840 NR_073034 NR_073036	inside exon	inside	9281	inside exon	0	4	4	3'UTR		9769	359	0.55	FALSE
332	chr22	44344664	44344764	101		115.16093	11631.254	5572908	5573008	142	6566	0.6579208	0.1465347	0.0000000	0.0000000	2.4851485	-1.000000e+100	-1.000000e+100	4.084018e+00	0.0011489	TRUE	0.0697121	TRUE	PNPLA3	NM_025225 NP_079501	NA	NA	0	NA	NA	NA	10	NA		0	0	0.55	FALSE
333	chr11	27655936	27656103	168		69.09647	11608.207	2973543	2973710	80	13488	0.7529762	0.1500000	0.0000000	0.0000000	2.8619048	-1.000000e+100	-1.000000e+100	4.253941e+00	0.0011581	TRUE	0.0697672	TRUE	BDNF-AS	NR_002832 NR_033312 NR_033313 NR_033314 NR_033315	NA	NA	0	NA	NA	NA	7	NA		0	0	0.56	FALSE
334	chr16	51173206	51173326	121		95.85863	11598.895	7328382	7328502	178	4772	0.5727273	0.0000000	0.0000000	0.0000000	2.2909091	NaN	NaN	1.000000e+100	0.0011602	TRUE	0.0697672	TRUE	SALL1	NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304	inside exon	inside	11857	inside exon	0	2	3	inside transcription region		14160	4818	0.56	FALSE
335	chr20	38902578	38902843	266		43.57949	11592.145	4403806	4404071	116	5560	3.4093985	0.0218045	0.3729323	0.0000000	13.2428571	4.096215e+00	-1.000000e+100	9.246372e+00	0.0011622	TRUE	0.0697672	TRUE	MAFB	NM_005461 NP_005452	downstream	downstream	415033	NA	NA	NA	1	NA		3359	971	0.56	FALSE
336	chr6	105529996	105530269	274		42.28617	11586.411	9856997	9857270	278	4151	0.6666058	0.0000000	0.0000000	0.0000000	2.6664234	NaN	NaN	1.000000e+100	0.0011637	TRUE	0.0697672	TRUE	LIN28B	NM_001004317 NP_001004317 XM_006715477 XP_006715540	inside exon	inside	124022	inside exon	0	4	4	3'UTR		125233	99901	0.56	FALSE
337	chr15	55905633	55905785	153		75.53545	11556.924	4218238	4218390	141	5154	0.6356209	0.0000000	0.0000000	0.1071895	2.4352941	NaN	1.000000e+100	1.000000e+100	0.0011734	TRUE	0.0701420	TRUE	PRTG	NM_173814 NP_776175 XM_005254310 XM_005254311 XM_006720473 XP_005254367 XP_005254368 XP_006720536 XR_429451	inside exon	inside	129392	inside exon	0	20	20	3'UTR		131438	122919	0.57	FALSE
338	chr12	97957748	97957905	158		73.08192	11546.943	10660195	10660352	300	1005	0.7142405	0.0886076	0.0000000	0.0000000	2.7683544	-1.000000e+100	-1.000000e+100	4.965454e+00	0.0011774	TRUE	0.0701762	TRUE	RMST	NR_024037	NA	NA	0	NA	NA	NA	7	NA		0	0	0.57	FALSE
339	chr21	44480539	44480656	118		97.69163	11527.612	2431197	2431314	56	13860	1.4830508	0.3152542	0.2338983	0.0000000	5.3830508	-4.306344e-01	-1.000000e+100	4.093836e+00	0.0011838	TRUE	0.0703451	TRUE	CBS	NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120	overlaps exon downstream	inside	15816	overlaps exon downstream	0	12	18	inside transcription region		23171	18313	0.57	FALSE
340	chr16	78013578	78013739	162		71.05265	11510.530	10469993	10470154	272	2496	0.8441358	0.0000000	0.0345679	0.0160494	3.3259259	1.000000e+100	1.000000e+100	1.000000e+100	0.0011898	TRUE	0.0704939	TRUE	VAT1L	NM_020927 NP_065978	inside exon	inside	191095	inside exon	0	9	9	3'UTR		191518	189012	0.57	FALSE
341	chr21	44485497	44485631	135		85.11997	11491.197	2431886	2432020	56	13860	3.3344444	0.4400000	0.7466667	0.1777778	11.9733333	7.629608e-01	-1.307429e+00	4.766178e+00	0.0011979	TRUE	0.0705618	TRUE	CBS	NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120	inside exon	inside	10841	inside exon	0	7	18	inside transcription region		23171	18313	0.57	FALSE
342	chr6	120784755	120784945	191		60.09257	11477.681	11585308	11585498	321	1938	1.4573298	0.0000000	0.2701571	0.1183246	5.4408377	1.000000e+100	1.000000e+100	1.000000e+100	0.0012019	TRUE	0.0705618	TRUE	TBC1D32	NM_152730 NP_689943 NR_104452 XM_005266861 XP_005266918	downstream	downstream	870699	NA	NA	NA	32	NA		255017	253659	0.57	FALSE
343	chr4	189020189	189020329	141		81.33397	11468.090	12668285	12668425	499	3316	0.4950355	0.0000000	0.0000000	0.0000000	1.9801418	NaN	NaN	1.000000e+100	0.0012047	TRUE	0.0705618	TRUE	TRIML2	NM_173553 NP_775824 XM_006714136 XP_006714199	inside exon	inside	10093	inside exon	0	5	5	inside transcription region		10639	6378	0.57	FALSE
344	chr13	100638130	100638280	151		75.86444	11455.530	5450767	5450917	193	5501	1.1099338	0.0000000	0.0000000	0.0000000	4.4397351	NaN	NaN	1.000000e+100	0.0012091	TRUE	0.0705618	TRUE	ZIC2	NM_007129 NP_009060	inside exon	inside	4104	inside exon	0	3	3	3'UTR		4993	3617	0.57	FALSE
345	chr15	43891356	43891586	231		49.54871	11445.752	2700119	2700349	82	5237	1.9813853	0.4294372	0.0000000	0.0874459	7.4086580	-1.000000e+100	-2.295985e+00	4.108693e+00	0.0012123	TRUE	0.0705618	TRUE	CKMT1B	NM_020990 NP_066270 XM_005254150 XP_005254207	NA	NA	0	NA	NA	NA	9	NA		0	0	0.57	FALSE
346	chr4	41262664	41262814	151		75.79535	11445.098	3753127	3753277	117	11482	7.8506623	2.9470199	0.5033113	0.7417219	27.2105960	-2.549734e+00	-1.990307e+00	3.206840e+00	0.0012128	TRUE	0.0705618	TRUE	UCHL1	NM_004181 NP_004172	inside exon	inside	3766	inside exon	0	3	8	overlaps 5' UTR		11548	7357	0.57	FALSE
347	chr4	190400982	190401080	99		115.47696	11432.219	12676205	12676303	502	2056	0.7848485	0.0000000	0.2000000	0.0000000	2.9393939	1.000000e+100	NaN	1.000000e+100	0.0012177	TRUE	0.0705618	TRUE	FRG1	NM_004477 NP_004468 XM_005262879 XM_005262880 XM_006714166 XM_006725445 XM_006725446 XM_006725447 XP_005262936 XP_005262937 XP_006714229 XP_006725508 XP_006725509 XP_006725510	upstream	upstream	460894	NA	NA	NA	9	NA		22385	22119	0.57	FALSE
348	chr11	96461851	96462014	164		69.67388	11426.516	10912365	10912528	330	1985	2.3356707	0.1426829	0.2268293	0.3195122	8.6536585	6.687941e-01	1.163058e+00	5.922426e+00	0.0012206	TRUE	0.0705618	TRUE	JRKL-AS1	NR_047481	NA	NA	0	NA	NA	NA	5	NA		0	0	0.57	FALSE
349	chr3	122628919	122629057	139		82.12934	11415.978	11760579	11760717	365	2945	0.5075540	0.0000000	0.0000000	0.0086331	2.0215827	NaN	1.000000e+100	1.000000e+100	0.0012255	TRUE	0.0705618	TRUE	SEMA5B	NM_001031702 NM_001256346 NM_001256347 NM_001256348 NM_018987 NP_001026872 NP_001243275 NP_001243276 NP_001243277 NR_046079	NA	NA	0	NA	NA	NA	23	NA		0	0	0.57	FALSE
350	chr13	43439431	43439631	201		56.78489	11413.763	2379641	2379841	57	13438	0.6791045	0.0000000	0.0000000	0.0467662	2.6696517	NaN	1.000000e+100	1.000000e+100	0.0012259	TRUE	0.0705618	TRUE	EPSTI1	NM_001002264 NM_033255 NP_001002264 NP_150280 XM_005266596 XM_005266597 XM_006719896 XP_005266653 XP_005266654 XP_006719959	downstream	downstream	126776	NA	NA	NA	13	NA		105883	103915	0.57	FALSE
351	chr14	93399027	93399196	170		66.97446	11385.658	8679741	8679910	253	12111	1.0373529	0.0929412	0.0000000	0.0000000	4.0564706	-1.000000e+100	-1.000000e+100	5.447763e+00	0.0012375	TRUE	0.0710218	TRUE	CHGA	NM_001275 NP_001266 XM_005267292 XM_006725160 XP_005267349 XP_006725223	inside exon	inside	9582	inside exon	0	6	7	inside transcription region		12193	11524	0.57	FALSE
352	chrX	2779619	2779763	145		78.26517	11348.450	516834	516978	8	1880	0.7620690	0.0000000	0.0000000	0.0000000	3.0482759	NaN	NaN	1.000000e+100	0.0012501	TRUE	0.0713508	TRUE	GYG2	NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 NP_001073324 NP_001171631 NP_001171632 NP_001171633 NP_003909 XM_005274617 XM_005274618 XM_005274619 XM_005274621 XM_005274622 XM_006724521 XM_006724522 XP_005274674 XP_005274675 XP_005274676 XP_005274678 XP_005274679 XP_006724584 XP_006724585	inside exon	inside	6585	inside exon	0	4	6	inside transcription region		27827	26079	0.57	FALSE
353	chr1	17301331	17301518	188		60.35846	11347.390	2835450	2835637	74	6061	2.0590426	0.1680851	0.1127660	0.0000000	7.9553191	-5.758603e-01	-1.000000e+100	5.564656e+00	0.0012503	TRUE	0.0713508	TRUE	MFAP2	NM_001135247 NM_001135248 NM_002403 NM_017459 NP_001128719 NP_001128720 NP_002394 NP_059453	inside exon	inside	6563	inside exon	0	9	9	overlaps 3'UTR		7082	3353	0.57	FALSE
354	chr3	57126779	57126910	132		85.86415	11334.067	7280474	7280605	180	8154	0.6424242	0.0000000	0.0000000	0.0000000	2.5696970	NaN	NaN	1.000000e+100	0.0012566	TRUE	0.0715092	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	inside exon	inside	77421	inside exon	0	14	14	3'UTR		80321	13261	0.57	FALSE
355	chr18	6950781	6950915	135		83.82254	11316.044	515673	515807	17	3800	0.4688889	0.0000000	0.0000000	0.0000000	1.8755556	NaN	NaN	1.000000e+100	0.0012637	TRUE	0.0717128	TRUE	LAMA1	NM_005559 NP_005550	inside exon	inside	166898	inside exon	0	57	62	inside transcription region		176070	95663	0.57	FALSE
356	chr2	77320588	77320749	162		69.69347	11290.342	8969230	8969391	213	11162	0.8793210	0.0000000	0.0000000	0.0000000	3.5172840	NaN	NaN	1.000000e+100	0.0012753	TRUE	0.0721631	TRUE	LRRTM4	NM_001134745 NM_001282924 NM_001282928 NM_024993 NP_001128217 NP_001269853 NP_001269857 NP_079269	inside intron	inside	428753	inside intron	344546	4	4	inside transcription region		774652	772976	0.59	FALSE
357	chr16	65265129	65265283	155		72.63022	11257.683	8195835	8195989	214	5478	1.1048387	0.0116129	0.0761290	0.0000000	4.3316129	2.712718e+00	-1.000000e+100	8.543032e+00	0.0012860	TRUE	0.0725651	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.59	FALSE
358	chr2	5833489	5833608	120		93.66695	11240.034	203557	203676	16	8660	0.7125000	0.0000000	0.0000000	0.0000000	2.8500000	NaN	NaN	1.000000e+100	0.0012954	TRUE	0.0728918	TRUE	SOX11	NM_003108 NP_003099	inside exon	inside	690	inside exon	0	1	1	inside transcription region		8718	1325	0.59	FALSE
359	chr4	189012646	189012806	161		69.63750	11211.637	12668034	12668194	498	639	0.7276398	0.2335404	0.0000000	0.0000000	2.6770186	-1.000000e+100	-1.000000e+100	3.518883e+00	0.0013088	TRUE	0.0734443	TRUE	TRIML2	NM_173553 NP_775824 XM_006714136 XP_006714199	inside exon	inside	13938	inside exon	0	8	8	inside transcription region		14317	13995	0.59	FALSE
360	chr7	121684476	121684622	147		76.05366	11179.888	12250164	12250310	332	16420	0.9622449	0.0000000	0.0000000	0.0000000	3.8489796	NaN	NaN	1.000000e+100	0.0013221	TRUE	0.0738340	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside exon	inside	171317	inside exon	0	23	30	inside transcription region		188931	187720	0.60	FALSE
361	chr20	38900268	38900415	148		75.53378	11178.999	4402023	4402170	116	5560	0.4331081	0.0000000	0.0000000	0.0000000	1.7324324	NaN	NaN	1.000000e+100	0.0013231	TRUE	0.0738340	TRUE	MAFB	NM_005461 NP_005452	downstream	downstream	417461	NA	NA	NA	1	NA		3359	971	0.60	FALSE
362	chr19	54446205	54446446	242		46.13468	11164.593	11721484	11721725	396	1943	0.7371901	0.0000000	0.0000000	0.0000000	2.9487603	NaN	NaN	1.000000e+100	0.0013304	TRUE	0.0738593	TRUE	CACNG7	NM_031896 NP_114102 XM_005259124 XM_005259125 XP_005259181 XP_005259182	inside exon	inside	30214	inside exon	0	5	5	3'UTR		30978	29461	0.61	FALSE
363	chr13	56144625	56144732	108		103.36411	11163.323	3920131	3920238	121	13379	0.5703704	0.0000000	0.0000000	0.0000000	2.2814815	NaN	NaN	1.000000e+100	0.0013309	TRUE	0.0738593	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.61	FALSE
364	chr12	48366904	48367056	153		72.83838	11144.272	5325359	5325511	133	9891	0.6624183	0.0000000	0.0000000	0.0000000	2.6496732	NaN	NaN	1.000000e+100	0.0013382	TRUE	0.0740455	TRUE	COL2A1	NM_001844 NM_033150 NP_001835 NP_149162 XM_006719242 XP_006719305	inside exon	inside	31229	inside exon	0	53	53	3'UTR		31537	30914	0.61	FALSE
365	chr3	32939107	32939302	196		56.81909	11136.543	3400027	3400222	82	7451	3.4535714	0.7877551	1.1061224	0.6693878	11.2510204	4.896920e-01	-2.349050e-01	3.836165e+00	0.0013416	TRUE	0.0740455	TRUE	TRIM71	NM_001039111 NP_001034200	downstream	downstream	79597	NA	NA	NA	4	NA		74261	73730	0.61	FALSE
366	chr19	17715046	17715179	134		82.90644	11109.463	4872273	4872406	149	4082	0.7884328	0.0000000	0.1507463	0.0000000	3.0029851	1.000000e+100	NaN	1.000000e+100	0.0013510	TRUE	0.0743610	TRUE	UNC13A	NM_001080421 NP_001073890 XM_006722692 XP_006722755	inside exon	inside	83871	inside exon	0	44	44	3'UTR		86913	82145	0.61	FALSE
367	chr1	223200941	223201125	185		59.94251	11089.365	26369149	26369333	754	8216	1.4351351	0.0000000	0.0000000	0.0000000	5.7405405	NaN	NaN	1.000000e+100	0.0013593	TRUE	0.0746125	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	212510	NA	NA	NA	10	NA		190906	63148	0.61	FALSE
368	chr12	7947540	7947867	328		33.73228	11064.188	1192013	1192340	43	6141	1.1428354	0.1231707	0.3371951	0.1231707	3.9878049	1.452924e+00	0.000000e+00	5.016863e+00	0.0013703	TRUE	0.0750136	TRUE	NANOG	NM_024865 NP_079141 XM_005253484 XP_005253541	inside exon	inside	5545	inside exon	0	4	4	overlaps 3'UTR		6660	5480	0.61	FALSE
369	chr2	189460247	189460602	356		31.04512	11052.062	18112127	18112482	489	1531	0.5483146	0.0000000	0.0000000	0.0000000	2.1932584	NaN	NaN	1.000000e+100	0.0013765	TRUE	0.0751469	TRUE	GULP1	NM_001252668 NM_001252669 NM_016315 NP_001239597 NP_001239598 NP_057399 NR_045562 NR_045563 XM_006712580 XM_006712581 XM_006712582 XM_006712583 XM_006712584 XM_006712585 XM_006712586 XM_006712587 XM_006712588 XM_006712589 XM_006712590 XM_006712591 XP_006712643 XP_006712644 XP_006712645 XP_006712646 XP_006712647 XP_006712648 XP_006712649 XP_006712650 XP_006712651 XP_006712652 XP_006712653 XP_006712654	inside exon	inside	302857	inside exon	0	13	13	3'UTR		303262	116308	0.62	FALSE
370	chrX	2799342	2799487	146		75.57142	11033.427	517179	517324	11	1566	0.7931507	0.0000000	0.0000000	0.0000000	3.1726027	NaN	NaN	1.000000e+100	0.0013857	TRUE	0.0751645	TRUE	GYG2	NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 NP_001073324 NP_001171631 NP_001171632 NP_001171633 NP_003909 XM_005274617 XM_005274618 XM_005274619 XM_005274621 XM_005274622 XM_006724521 XM_006724522 XP_005274674 XP_005274675 XP_005274676 XP_005274678 XP_005274679 XP_006724584 XP_006724585	inside exon	inside	26308	inside exon	0	6	6	3'UTR		27827	26079	0.62	FALSE
371	chr12	54982309	54982408	100		110.32664	11032.664	6731995	6732094	171	100	0.4940000	0.0000000	0.0000000	0.0000000	1.9760000	NaN	NaN	1.000000e+100	0.0013862	TRUE	0.0751645	TRUE	PPP1R1A	NM_006741 NP_006732 XM_005268995 XM_006719471 XP_005269052 XP_006719534	inside exon	inside	35	inside exon	0	1	7	5' UTR		9419	8101	0.62	FALSE
372	chr7	131186015	131186277	263		41.93117	11027.897	13362697	13362959	370	10803	7.8420152	2.1437262	4.9034221	4.0653992	20.2555133	1.193668e+00	9.232764e-01	3.240122e+00	0.0013880	TRUE	0.0751645	TRUE	PODXL	NM_001018111 NM_005397 NP_001018121 NP_005388	inside exon	inside	55099	inside exon	0	8	8	3'UTR		56355	52048	0.62	FALSE
373	chr16	65264698	65264912	215		51.20562	11009.208	8195435	8195649	214	5478	0.8379070	0.0000000	0.0000000	0.0000000	3.3516279	NaN	NaN	1.000000e+100	0.0013976	TRUE	0.0752588	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.62	FALSE
374	chr4	55945391	55945583	193		56.92465	10986.457	4547257	4547449	135	3976	0.7344560	0.2176166	0.2113990	0.0000000	2.5088083	-4.182020e-02	-1.000000e+100	3.527142e+00	0.0014063	TRUE	0.0752588	TRUE	KDR	NM_002253 NP_002244	inside exon	inside	46179	inside exon	0	30	30	3'UTR		47336	45352	0.62	FALSE
375	chr13	56150941	56151071	131		83.83355	10982.195	3923090	3923220	121	13379	0.5458015	0.0000000	0.0000000	0.0000000	2.1832061	NaN	NaN	1.000000e+100	0.0014092	TRUE	0.0752588	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.62	FALSE
376	chr13	56150772	56150918	147		74.63068	10970.710	3922943	3923089	121	13379	0.5340136	0.0802721	0.0000000	0.0000000	2.0557823	-1.000000e+100	-1.000000e+100	4.678645e+00	0.0014148	TRUE	0.0752588	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.62	FALSE
377	chr2	67559010	67559162	153		71.65524	10963.252	7342633	7342785	170	8050	0.7274510	0.1620915	0.0000000	0.0000000	2.7477124	-1.000000e+100	-1.000000e+100	4.083351e+00	0.0014177	TRUE	0.0752588	TRUE	ETAA1	NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435	upstream	upstream	65280	NA	NA	NA	6	NA		13091	12589	0.62	FALSE
378	chr8	77557275	77557627	353		31.04512	10958.927	5854470	5854822	214	900	0.3529745	0.0000000	0.0000000	0.0000000	1.4118980	NaN	NaN	1.000000e+100	0.0014198	TRUE	0.0752588	TRUE	ZFHX4-AS1	NR_024360	NA	NA	0	NA	NA	NA	4	NA		0	0	0.62	FALSE
379	chr20	62073759	62073884	126		86.94306	10954.826	7028104	7028229	193	8206	1.0146825	0.0000000	0.1396825	0.1253968	3.7936508	1.000000e+100	1.000000e+100	1.000000e+100	0.0014216	TRUE	0.0752588	TRUE	KCNQ2	NM_004518 NM_172106 NM_172107 NM_172108 NM_172109 NP_004509 NP_742104 NP_742105 NP_742106 NP_742107 XM_006723787 XM_006723788 XM_006723789 XM_006723790 XM_006723791 XM_006723792 XP_006723850 XP_006723851 XP_006723852 XP_006723853 XP_006723854 XP_006723855	inside exon	inside	30109	inside exon	0	5	8	inside transcription region		38961	38718	0.62	FALSE
380	chr11	27636430	27636731	302		36.26158	10950.998	2969161	2969462	79	3618	0.6687086	0.0000000	0.0000000	0.2476821	2.4271523	NaN	1.000000e+100	1.000000e+100	0.0014234	TRUE	0.0752588	TRUE	BDNF-AS	NR_002832 NR_033312 NR_033313 NR_033314 NR_033315	NA	NA	0	NA	NA	NA	7	NA		0	0	0.62	FALSE
381	chr5	141693923	141694126	204		53.68028	10950.777	12326281	12326484	384	14439	0.6747549	0.0000000	0.0990196	0.0000000	2.6000000	1.000000e+100	NaN	1.000000e+100	0.0014234	TRUE	0.0752588	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	10494	inside exon	0	3	3	inside transcription region		14628	5556	0.62	FALSE
382	chr15	43990212	43990346	135		80.90075	10921.601	2727625	2727759	83	5230	1.1507407	0.0000000	0.0000000	0.0000000	4.6029630	NaN	NaN	1.000000e+100	0.0014362	TRUE	0.0755484	TRUE	CKMT1A	NM_001015001 NP_001015001 XM_005254498 XP_005254555	inside exon	inside	5128	inside exon	0	8	10	inside transcription region		6336	5038	0.63	FALSE
383	chr1	55492412	55492512	101		108.12961	10921.091	9838569	9838669	249	2497	1.6559406	0.0000000	0.0000000	0.0000000	6.6237624	NaN	NaN	1.000000e+100	0.0014363	TRUE	0.0755484	TRUE	PCSK9	NM_174936 NP_777596 NR_110451	NA	NA	0	NA	NA	NA	6	NA		0	0	0.63	FALSE
384	chr13	56151361	56151503	143		75.85189	10846.821	3923374	3923516	121	13379	1.0342657	0.0391608	0.0000000	0.0000000	4.0979021	-1.000000e+100	-1.000000e+100	6.709330e+00	0.0014725	TRUE	0.0770996	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.63	FALSE
385	chr11	27638052	27638211	160		67.77981	10844.769	2970400	2970559	79	3618	0.6971875	0.0000000	0.0000000	0.0337500	2.7550000	NaN	1.000000e+100	1.000000e+100	0.0014735	TRUE	0.0770996	TRUE	BDNF-AS	NR_002832 NR_033312 NR_033313 NR_033314 NR_033315	NA	NA	0	NA	NA	NA	7	NA		0	0	0.63	FALSE
386	chr16	65263832	65264026	195		55.34134	10791.561	8194600	8194794	214	5478	2.8489744	1.4656410	0.6625641	0.3323077	8.9353846	-1.145400e+00	-2.140940e+00	2.607998e+00	0.0014994	TRUE	0.0780522	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.63	FALSE
387	chr17	47115573	47115811	239		45.15214	10791.360	9731144	9731382	231	18864	0.5912134	0.0000000	0.0000000	0.0000000	2.3648536	NaN	NaN	1.000000e+100	0.0014994	TRUE	0.0780522	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside intron	inside	40799	inside intron	2929	6	13	inside transcription region		58733	51698	0.63	FALSE
388	chr7	121653691	121653875	185		58.24465	10775.261	12248841	12249025	330	3506	0.5764865	0.0000000	0.0000000	0.0000000	2.3059459	NaN	NaN	1.000000e+100	0.0015082	TRUE	0.0783058	TRUE	PTPRZ1	NM_001206838 NM_001206839 NM_002851 NP_001193767 NP_001193768 NP_002842 XM_005250519 XM_006716076 XP_005250576 XP_006716139	inside intron	inside	140532	inside intron	-2328	12	30	inside transcription region		188931	187720	0.63	FALSE
389	chr6	31132905	31133063	159		67.61051	10750.071	3619390	3619548	80	1705	16.7701258	0.9081761	1.0012579	0.5308176	64.6402516	1.407696e-01	-7.747558e-01	6.153317e+00	0.0015225	TRUE	0.0788438	TRUE	POU5F1	NM_001173531 NM_001285986 NM_001285987 NM_002701 NM_203289 NP_001167002 NP_001272915 NP_001272916 NP_002692 NP_976034	inside exon	inside	5388	inside exon	0	4	5	inside transcription region		6337	6019	0.63	FALSE
390	chr7	150037189	150037293	105		102.16034	10726.836	15684345	15684449	431	3322	4.7109524	0.1561905	0.5809524	0.8895238	17.2171429	1.895113e+00	2.509727e+00	6.784395e+00	0.0015342	TRUE	0.0792449	TRUE	RARRES2	NM_002889 NP_002880 XM_005250033 XP_005250090	inside exon	inside	1470	inside exon	0	3	6	inside transcription region		3356	1984	0.63	FALSE
391	chr6	21367093	21367245	153		70.03319	10715.079	2378261	2378413	41	5423	1.1058824	0.0797386	0.0013072	0.0339869	4.3084967	-5.930737e+00	-1.230298e+00	5.755763e+00	0.0015403	TRUE	0.0793074	TRUE	CDKAL1	NM_017774 NP_060244 XM_006715127 XM_006715128 XP_006715190 XP_006715191	downstream	downstream	832405	NA	NA	NA	16	NA		697946	684688	0.63	FALSE
392	chr7	150037525	150037718	194		55.19845	10708.499	15684491	15684684	431	3322	3.4902062	0.7536082	0.6340206	0.2628866	12.3103093	-2.492850e-01	-1.519374e+00	4.029908e+00	0.0015432	TRUE	0.0793074	TRUE	RARRES2	NM_002889 NP_002880 XM_005250033 XP_005250090	inside exon	inside	1045	inside exon	0	2	6	overlaps 5' UTR		3356	1984	0.63	FALSE
393	chr3	57125252	57125427	176		60.73367	10689.125	7279420	7279595	180	8154	0.6880682	0.0000000	0.0000000	0.0000000	2.7522727	NaN	NaN	1.000000e+100	0.0015552	TRUE	0.0793728	TRUE	IL17RD	NM_017563 NP_060033 XM_005265238 XM_006713209 XP_005265295 XP_006713272	inside exon	inside	78904	inside exon	0	14	14	3'UTR		80321	13261	0.63	FALSE
394	chr21	44478255	44478363	109		98.06521	10689.108	2430584	2430692	56	13860	4.0440367	0.2752294	0.4935780	0.1834862	15.2238532	8.426437e-01	-5.849625e-01	5.789555e+00	0.0015552	TRUE	0.0793728	TRUE	CBS	NM_000071 NM_001178008 NM_001178009 NP_000062 NP_001171479 NP_001171480 XM_006724057 XP_006724120	inside exon	inside	18109	inside exon	0	15	18	inside transcription region		23171	18313	0.63	FALSE
395	chr13	51746073	51746203	131		81.55545	10683.764	3595937	3596067	92	10662	1.2007634	0.0427481	0.0000000	0.0000000	4.7603053	-1.000000e+100	-1.000000e+100	6.799050e+00	0.0015583	TRUE	0.0793728	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.63	FALSE
396	chr15	73996593	73996813	221		48.32318	10679.422	7120244	7120464	215	4815	1.4875566	0.0696833	0.2352941	0.5438914	5.1013575	1.755581e+00	2.964435e+00	6.193925e+00	0.0015603	TRUE	0.0793728	TRUE	CD276	NM_001024736 NM_025240 NP_001019907 NP_079516 XM_005254699 XM_005254700 XP_005254756 XP_005254757	inside exon	inside	19971	inside exon	0	6	10	inside transcription region		30237	13279	0.63	FALSE
397	chr8	15621712	15621981	270		39.50314	10665.848	1075970	1076239	36	436	0.7605556	0.0000000	0.0000000	0.0000000	3.0422222	NaN	NaN	1.000000e+100	0.0015694	TRUE	0.0794420	TRUE	TUSC3	NM_006765 NM_178234 NP_006756 NP_839952 XM_005273646 XM_005273647 XM_005273648 XP_005273703 XP_005273704 XP_005273705	NA	NA	0	NA	NA	NA	2	NA		0	0	0.63	FALSE
398	chrX	113837320	113837467	148		72.06371	10665.429	6945132	6945279	300	5470	3.4337838	0.0932432	0.0364865	0.0000000	13.6054054	-1.353637e+00	-1.000000e+100	7.188965e+00	0.0015695	TRUE	0.0794420	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	inside intron	inside	18769	inside intron	10806	2	7	5' UTR		326073	180632	0.63	FALSE
399	chr12	7948253	7948463	211		50.35167	10624.202	1192630	1192840	43	6141	1.2445498	0.1109005	0.3355450	0.2426540	4.2890995	1.597241e+00	1.129635e+00	5.273337e+00	0.0015924	TRUE	0.0802457	TRUE	NANOG	NM_024865 NP_079141 XM_005253484 XP_005253541	inside exon	inside	6258	inside exon	0	4	4	3'UTR		6660	5480	0.64	FALSE
400	chr3	54671898	54672038	141		75.33654	10622.452	7095493	7095633	171	7351	4.3879433	0.4170213	0.3730496	0.5900709	16.1716312	-1.607534e-01	5.007674e-01	5.277200e+00	0.0015934	TRUE	0.0802457	TRUE	ESRG	NR_027122	NA	NA	0	NA	NA	NA	4	NA		0	0	0.64	FALSE
401	chr11	12965225	12965407	183		57.93157	10601.477	2051642	2051824	45	1584	0.8133880	0.3737705	0.0000000	0.1071038	2.7726776	-1.000000e+100	-1.803143e+00	2.891055e+00	0.0016041	TRUE	0.0803015	TRUE	TEAD1	NM_021961 NP_068780	inside exon	inside	63970	inside exon	0	7	7	3'UTR		65029	57481	0.64	FALSE
402	chr2	164459483	164459607	125		84.79950	10599.938	16027165	16027289	417	3078	0.6424000	0.0000000	0.0000000	0.0000000	2.5696000	NaN	NaN	1.000000e+100	0.0016047	TRUE	0.0803015	TRUE	FIGN	NM_018086 NP_060556 XM_005246661 XM_005246662 XP_005246718 XP_005246719	downstream	downstream	132906	NA	NA	NA	3	NA		128395	125375	0.64	FALSE
403	chr13	51744244	51744364	121		87.44572	10580.932	3594431	3594551	92	10662	0.5309917	0.0000000	0.0000000	0.0000000	2.1239669	NaN	NaN	1.000000e+100	0.0016146	TRUE	0.0803015	TRUE	LINC00371	NR_102431 NR_102432	NA	NA	0	NA	NA	NA	5	NA		0	0	0.65	FALSE
404	chr17	47123252	47123375	124		85.29728	10576.863	9731893	9732016	231	18864	0.7254032	0.0000000	0.0000000	0.0000000	2.9016129	NaN	NaN	1.000000e+100	0.0016172	TRUE	0.0803015	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	48478	inside exon	0	11	13	inside transcription region		58733	51698	0.65	FALSE
405	chr1	26737877	26738073	197		53.62101	10563.339	4577539	4577735	114	2417	3.0578680	0.0000000	0.0000000	0.0000000	12.2314721	NaN	NaN	1.000000e+100	0.0016250	TRUE	0.0803015	TRUE	LIN28A	NM_024674 NP_078950 XM_006710899 XM_006710900 XP_006710962 XP_006710963	inside exon	inside	608	inside exon	0	2	4	inside transcription region		18950	15566	0.65	FALSE
406	chr15	26792227	26792327	101		104.56038	10560.599	475324	475424	11	4122	0.7787129	0.0000000	0.0000000	0.0000000	3.1148515	NaN	NaN	1.000000e+100	0.0016271	TRUE	0.0803015	TRUE	GABRB3	NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801	inside exon	inside	392359	inside exon	0	10	10	3'UTR		395992	391643	0.65	FALSE
407	chr13	56157678	56157780	103		102.49381	10556.863	3927811	3927913	121	13379	0.4733010	0.0000000	0.0000000	0.0000000	1.8932039	NaN	NaN	1.000000e+100	0.0016290	TRUE	0.0803015	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.65	FALSE
408	chr15	26791985	26792215	231		45.57193	10527.116	475093	475323	11	4122	0.5785714	0.0000000	0.0000000	0.0000000	2.3142857	NaN	NaN	1.000000e+100	0.0016438	TRUE	0.0803015	TRUE	GABRB3	NM_000814 NM_001191320 NM_001191321 NM_001278631 NM_021912 NP_000805 NP_001178249 NP_001178250 NP_001265560 NP_068712 NR_103801	inside exon	inside	392471	inside exon	0	10	10	3'UTR		395992	391643	0.65	FALSE
409	chr6	3225664	3225927	264		39.86839	10525.255	465301	465564	12	3330	20.8198864	11.7886364	14.7166667	9.4219697	47.3522727	3.200541e-01	-3.232962e-01	2.006037e+00	0.0016451	TRUE	0.0803015	TRUE	TUBB2B	NM_178012 NP_821080	inside exon	inside	2041	inside exon	0	4	4	inside transcription region		3473	2792	0.65	FALSE
410	chr12	110719136	110719284	149		70.60827	10520.632	12183242	12183390	332	149	11.1996644	32.4308725	5.0899329	5.2496644	2.0281879	-2.671649e+00	-2.627071e+00	-3.999105e+00	0.0016472	TRUE	0.0803015	TRUE	ATP2A2	NM_001135765 NM_001681 NM_170665 NP_001672 NP_733765 XM_005253888 XP_005253945 XR_243009	inside exon	inside	104	inside exon	0	1	21	5' UTR		69865	68515	0.65	FALSE
411	chr6	132228048	132228148	101		104.15843	10520.001	12338916	12339016	348	11438	0.7702970	0.0000000	0.0000000	0.0000000	3.0811881	NaN	NaN	1.000000e+100	0.0016477	TRUE	0.0803015	TRUE	ENPP1	NM_006208 NP_006199 XM_005267017 XP_005267074	downstream	downstream	98892	NA	NA	NA	25	NA		87139	82475	0.65	FALSE
412	chr1	223198377	223198524	148		71.06830	10518.108	26367074	26367221	754	8216	2.6807432	0.1216216	0.2837838	0.4621622	9.8554054	1.222392e+00	1.925999e+00	6.340444e+00	0.0016495	TRUE	0.0803015	TRUE	DISP1	NM_032890 NP_116279 XM_005273335 XM_005273336 XM_006711592 XM_006711593 XM_006711594 XM_006711595 XP_005273392 XP_005273393 XP_006711655 XP_006711656 XP_006711657 XP_006711658	downstream	downstream	209946	NA	NA	NA	10	NA		190906	63148	0.65	FALSE
413	chr13	56149799	56149905	107		98.29383	10517.440	3922219	3922325	121	13379	0.8752336	0.0000000	0.0000000	0.0000000	3.5009346	NaN	NaN	1.000000e+100	0.0016498	TRUE	0.0803015	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.65	FALSE
414	chrX	5809466	5809630	165		63.71923	10513.672	648990	649154	19	2072	0.4406061	0.0715152	0.0000000	0.0000000	1.6909091	-1.000000e+100	-1.000000e+100	4.563406e+00	0.0016527	TRUE	0.0803015	TRUE	NLGN4X	NM_001282145 NM_001282146 NM_020742 NM_181332 NP_001269074 NP_001269075 NP_065793 NP_851849 XM_005274564 XM_005274565 XM_005274566 XM_005274568 XM_006724504 XP_005274621 XP_005274622 XP_005274623 XP_005274625 XP_006724567	inside exon	inside	337076	inside exon	0	7	7	3'UTR		338623	258649	0.65	FALSE
415	chr22	44345535	44345636	102		103.00462	10506.471	5573039	5573140	142	6566	0.6004902	0.0000000	0.0000000	0.0000000	2.4019608	NaN	NaN	1.000000e+100	0.0016565	TRUE	0.0803015	TRUE	PNPLA3	NM_025225 NP_079501	NA	NA	0	NA	NA	NA	10	NA		0	0	0.65	FALSE
416	chr4	93524782	93524901	120		87.50493	10500.592	7118893	7119012	252	3836	0.4733333	0.0000000	0.0000000	0.0000000	1.8933333	NaN	NaN	1.000000e+100	0.0016582	TRUE	0.0803015	TRUE	GRID2	NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258	inside intron	inside	299232	inside intron	-13345	2	15	inside transcription region		1468099	1467841	0.65	FALSE
417	chr16	65264044	65264301	258		40.62704	10481.776	8194812	8195069	214	5478	2.1147287	0.0457364	0.1589147	0.1186047	8.1356589	1.796837e+00	1.374745e+00	7.474772e+00	0.0016706	TRUE	0.0805505	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.65	FALSE
418	chr16	51173735	51173966	232		45.16783	10478.936	7328663	7328894	178	4772	0.4838362	0.0000000	0.0000000	0.0000000	1.9353448	NaN	NaN	1.000000e+100	0.0016714	TRUE	0.0805505	TRUE	SALL1	NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304	inside exon	inside	11217	inside exon	0	2	3	inside transcription region		14160	4818	0.65	FALSE
419	chr19	54445290	54445539	250		41.79278	10448.195	11720783	11721032	396	1943	0.5056000	0.0000000	0.0000000	0.0000000	2.0224000	NaN	NaN	1.000000e+100	0.0016886	TRUE	0.0810539	TRUE	CACNG7	NM_031896 NP_114102 XM_005259124 XM_005259125 XP_005259181 XP_005259182	inside exon	inside	29299	inside exon	0	5	5	inside transcription region		30978	29461	0.66	FALSE
420	chr13	56153923	56154055	133		78.53720	10445.448	3925577	3925709	121	13379	0.9563910	0.0000000	0.0000000	0.0000000	3.8255639	NaN	NaN	1.000000e+100	0.0016899	TRUE	0.0810539	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.66	FALSE
421	chr20	38903204	38903358	155		67.32892	10435.983	4404397	4404551	116	5560	1.4119355	0.0000000	0.0709677	0.0000000	5.5767742	1.000000e+100	NaN	1.000000e+100	0.0016954	TRUE	0.0811253	TRUE	MAFB	NM_005461 NP_005452	downstream	downstream	414518	NA	NA	NA	1	NA		3359	971	0.66	FALSE
422	chr12	59718746	59718947	202		51.55629	10414.370	7620836	7621037	197	6694	1.0264851	0.0000000	0.0000000	0.0000000	4.1059406	NaN	NaN	1.000000e+100	0.0017087	TRUE	0.0815680	TRUE	SLC16A7	NM_001270622 NM_001270623 NM_004731 NP_001257551 NP_001257552 NP_004722 NR_073055 NR_073056 XM_005269231 XM_006719693 XP_005269288 XP_006719756	upstream	upstream	270874	NA	NA	NA	6	NA		193814	74877	0.66	FALSE
423	chr7	83094324	83094479	156		66.62527	10393.542	8282879	8283034	218	5588	1.6435897	0.0000000	0.0000000	0.0000000	6.5743590	NaN	NaN	1.000000e+100	0.0017196	TRUE	0.0815922	TRUE	SEMA3E	NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250	inside intron	inside	184000	inside intron	-1319	4	17	inside transcription region		285257	280956	0.66	FALSE
424	chr9	99981587	99981771	185		56.16582	10390.676	6936029	6936213	238	7264	1.0443243	0.0000000	0.6659459	0.0529730	3.4583784	1.000000e+100	1.000000e+100	1.000000e+100	0.0017214	TRUE	0.0815922	TRUE	LOC100499484	NR_036526	NA	NA	0	NA	NA	NA	16	NA		0	0	0.66	FALSE
425	chr4	183721801	183721989	189		54.93701	10383.095	12325302	12325490	478	8341	0.6605820	0.0000000	0.0000000	0.0000000	2.6423280	NaN	NaN	1.000000e+100	0.0017252	TRUE	0.0815922	TRUE	TENM3	NM_001080477 NP_001073946 XM_006714256 XM_006714257 XM_006714258 XP_006714319 XP_006714320 XP_006714321	inside exon	inside	476702	inside exon	0	27	27	3'UTR		479078	476330	0.66	FALSE
426	chr2	241685155	241685326	172		60.36456	10382.705	23645417	23645588	635	9104	0.6037791	0.0000000	0.0000000	0.0000000	2.4151163	NaN	NaN	1.000000e+100	0.0017254	TRUE	0.0815922	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	74399	inside exon	0	31	43	inside transcription region		96895	74339	0.66	FALSE
427	chr12	7942037	7942154	118		87.87290	10369.002	1191156	1191273	42	325	1.3703390	0.0593220	0.0830508	0.2288136	5.1101695	4.854268e-01	1.947533e+00	6.428659e+00	0.0017329	TRUE	0.0816233	TRUE	NANOG	NM_024865 NP_079141 XM_005253484 XP_005253541	inside exon	inside	42	inside exon	0	1	4	5' UTR		6660	5480	0.66	FALSE
428	chr20	31387959	31388104	146		71.01235	10367.804	2807852	2807997	85	24597	3.8212329	1.7369863	1.8684932	1.1575342	10.5219178	1.052889e-01	-5.855315e-01	2.598739e+00	0.0017342	TRUE	0.0816233	TRUE	DNMT3B	NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 NM_175850 NP_001193984 NP_001193985 NP_008823 NP_787044 NP_787045 NP_787046	inside exon	inside	8552	inside exon	0	10	14	inside transcription region		17755	16212	0.66	FALSE
429	chr9	121253334	121253450	117		88.49919	10354.405	8707992	8708108	300	4272	2.0572650	0.0000000	0.0000000	0.0000000	8.2290598	NaN	NaN	1.000000e+100	0.0017431	TRUE	0.0817297	TRUE	BRINP1	NM_014618 NP_055433	downstream	downstream	878289	NA	NA	NA	8	NA		202831	146271	0.66	FALSE
430	chr1	62675574	62675850	277		37.36241	10349.388	10231825	10232101	267	17384	6.8481949	2.1862816	4.4194946	2.6180505	18.1689531	1.015402e+00	2.600137e-01	3.054924e+00	0.0017458	TRUE	0.0817297	TRUE	L1TD1	NM_001164835 NM_019079 NP_001158307 NP_061952	inside exon	inside	15100	inside exon	0	5	5	inside transcription region		17527	4743	0.66	FALSE
431	chr12	8948468	8948616	149		69.35344	10333.662	1368238	1368386	52	8328	0.9228188	0.0000000	0.0000000	0.0000000	3.6912752	NaN	NaN	1.000000e+100	0.0017557	TRUE	0.0817297	TRUE	RIMKLB	NM_020734 NP_065785 XM_006719116 XM_006719117 XM_006719118 XM_006719119 XM_006719120 XM_006719121 XM_006719122 XM_006719123 XM_006719124 XM_006719125 XM_006719126 XM_006719127 XM_006719128 XP_006719179 XP_006719180 XP_006719181 XP_006719182 XP_006719183 XP_006719184 XP_006719185 XP_006719186 XP_006719187 XP_006719188 XP_006719189 XP_006719190 XP_006719191	NA	NA	0	NA	NA	NA	9	NA		0	0	0.66	FALSE
432	chrX	29995973	29996073	101		102.30117	10332.418	2040408	2040508	80	101	1.0777228	0.0000000	0.0000000	0.0000000	4.3108911	NaN	NaN	1.000000e+100	0.0017564	TRUE	0.0817297	TRUE	IL1RAPL1	NM_014271 NP_055086 XM_005274441 XP_005274498	downstream	downstream	1390292	NA	NA	NA	11	NA		1368336	1166476	0.66	FALSE
433	chr1	6305260	6305418	159		64.97825	10331.541	924353	924511	30	1346	0.4918239	0.0000000	0.0000000	0.0000000	1.9672956	NaN	NaN	1.000000e+100	0.0017569	TRUE	0.0817297	TRUE	HES3	NM_001024598 NP_001019769	inside exon	inside	1008	inside exon	0	4	4	inside transcription region		1386	1141	0.66	FALSE
434	chr3	65340344	65340503	160		64.52732	10324.372	7962071	7962230	214	3821	0.5381250	0.0012500	0.0000000	0.0000000	2.1512500	-1.000000e+100	-1.000000e+100	1.074903e+01	0.0017608	TRUE	0.0817297	TRUE	MAGI1	NM_001033057 NM_004742 NM_015520 NP_001028229 NP_004733 NP_056335 XM_005265563 XM_005265564 XM_005265565 XM_005265566 XM_005265568 XM_005265570 XM_005265571 XM_005265574 XM_006713407 XM_006713408 XM_006713409 XM_006713410 XM_006713411 XM_006713412 XM_006713413 XM_006713414 XP_005265620 XP_005265621 XP_005265622 XP_005265623 XP_005265625 XP_005265627 XP_005265628 XP_005265631 XP_006713470 XP_006713471 XP_006713472 XP_006713473 XP_006713474 XP_006713475 XP_006713476 XP_006713477	inside exon	inside	684006	inside exon	0	23	23	3'UTR		684603	681930	0.66	FALSE
435	chr13	53307354	53307494	141		73.11638	10309.410	3909156	3909296	107	141	1.1879433	0.0000000	0.1829787	0.0000000	4.5687943	1.000000e+100	NaN	1.000000e+100	0.0017682	TRUE	0.0818874	TRUE	LECT1	NM_001011705 NM_007015 NP_001011705 NP_008946 XM_006719760 XM_006719761 XP_006719823 XP_006719824	inside exon	inside	6453	inside exon	0	3	6	inside transcription region		36547	36187	0.66	FALSE
436	chr10	53794232	53794387	156		66.00248	10296.386	5589483	5589638	138	5761	5.5849359	0.0961538	0.2512821	0.1974359	21.7948718	1.385891e+00	1.037968e+00	7.824428e+00	0.0017750	TRUE	0.0820143	TRUE	PRKG1	NM_001098512 NM_006258 NP_001091982 NP_006249 XM_005269970 XM_005269971 XM_005269972 XP_005270027 XP_005270028 XP_005270029	inside intron	inside	959998	inside intron	19857	6	18	inside transcription region		1223876	1219309	0.66	FALSE
437	chr16	65266378	65266543	166		61.84592	10266.423	8196834	8196999	214	5478	0.5385542	0.0000000	0.0000000	0.0000000	2.1542169	NaN	NaN	1.000000e+100	0.0017934	TRUE	0.0826717	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.66	FALSE
438	chr3	109047969	109048200	232		44.19498	10253.235	10143872	10144103	311	11345	1.0782328	0.0870690	0.5931034	0.0913793	3.5413793	2.768053e+00	6.970900e-02	5.346009e+00	0.0018031	TRUE	0.0828459	TRUE	DPPA4	NM_018189 NP_060659	inside intron	inside	8219	inside intron	41	5	6	inside transcription region		11431	8594	0.66	FALSE
439	chr16	65266239	65266375	137		74.80627	10248.459	8196697	8196833	214	5478	0.6021898	0.0000000	0.0000000	0.0000000	2.4087591	NaN	NaN	1.000000e+100	0.0018054	TRUE	0.0828459	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.66	FALSE
440	chr3	78373033	78373178	146		69.96685	10215.160	9029527	9029672	256	2419	1.4633562	0.3575342	0.0000000	0.0000000	5.4958904	-1.000000e+100	-1.000000e+100	3.942200e+00	0.0018278	TRUE	0.0836825	TRUE	ROBO1	NM_001145845 NM_002941 NM_133631 NP_001139317 NP_002932 NP_598334 XM_006713276 XM_006713277 XM_006713278 XP_006713339 XP_006713340 XP_006713341	downstream	downstream	364744	NA	NA	NA	23	NA		91534	60790	0.66	FALSE
441	chr1	114524494	114524661	168		60.73377	10203.273	15141244	15141411	417	1807	0.9767857	0.2702381	0.2833333	0.2059524	3.1476190	6.826930e-02	-3.919203e-01	3.541958e+00	0.0018362	TRUE	0.0838756	TRUE	OLFML3	NM_001286352 NM_001286353 NM_020190 NP_001273281 NP_001273282 NP_064575 XM_006710778 XP_006710841	inside exon	inside	2464	inside exon	0	2	2	3'UTR		2846	788	0.66	FALSE
442	chr13	110802399	110802635	237		43.00039	10191.093	5744250	5744486	212	1296	1.2103376	1.1518987	0.5721519	0.2185654	2.8987342	-1.009544e+00	-2.397877e+00	1.331409e+00	0.0018438	TRUE	0.0838756	TRUE	COL4A1	NM_001845 NP_001836	inside exon	inside	156861	inside exon	0	52	52	3'UTR		158186	156664	0.67	FALSE
443	chrX	86941110	86941277	168		60.65369	10189.820	5940401	5940568	237	2994	1.0657738	0.0583333	0.3166667	0.0428571	3.8452381	2.440573e+00	-4.447848e-01	6.042609e+00	0.0018445	TRUE	0.0838756	TRUE	KLHL4	NM_019117 NM_057162 NP_061990 NP_476503	downstream	downstream	168395	NA	NA	NA	11	NA		152335	148637	0.67	FALSE
444	chr8	72590866	72590966	101		100.78528	10179.314	5587272	5587372	200	5384	0.6143564	0.0000000	0.0000000	0.0000000	2.4574257	NaN	NaN	1.000000e+100	0.0018521	TRUE	0.0840326	TRUE	MSC	NM_005098 NP_005089	downstream	downstream	165765	NA	NA	NA	2	NA		2954	1517	0.68	FALSE
445	chr4	5822515	5822748	234		43.41234	10158.488	1191460	1191693	32	262	2.0995726	1.1222222	0.7487179	0.8487179	5.6786325	-5.838641e-01	-4.030013e-01	2.339185e+00	0.0018657	TRUE	0.0844606	TRUE	EVC	NM_014556 NM_153717 NP_714928 XM_005247952 XM_006713865 XM_006713866 XM_006713867 XP_005248009 XP_006713928 XP_006713929 XP_006713930 XR_427471 XR_427472 XR_427473 XR_427474 XR_427475 XR_427476 XR_427477	NA	NA	0	NA	NA	NA	24	NA		0	0	0.69	FALSE
446	chr16	51172900	51173017	118		85.85942	10131.412	7328257	7328374	178	4772	0.6360169	0.0000000	0.0000000	0.0000000	2.5440678	NaN	NaN	1.000000e+100	0.0018819	TRUE	0.0846715	TRUE	SALL1	NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304	inside exon	inside	12166	inside exon	0	2	3	inside transcription region		14160	4818	0.69	FALSE
447	chr16	9760985	9761084	100		101.20896	10120.896	1950655	1950754	53	7029	0.4670000	0.0000000	0.0000000	0.0000000	1.8680000	NaN	NaN	1.000000e+100	0.0018883	TRUE	0.0846715	TRUE	GRIN2A	NM_000833 NM_001134407 NM_001134408 NP_000824 NP_001127879 NP_001127880 XM_005255267 XM_005255268 XP_005255324 XP_005255325	downstream	downstream	515179	NA	NA	NA	13	NA		428998	417262	0.69	FALSE
448	chr13	96238297	96238390	94		107.49639	10104.661	4921004	4921097	174	6061	0.6292553	0.0000000	0.0000000	0.0000000	2.5170213	NaN	NaN	1.000000e+100	0.0018996	TRUE	0.0846715	TRUE	DZIP1	NM_014934 NM_198968 NP_055749 NP_945319 XM_005254032 XM_006719916 XM_006719917 XM_006719918 XM_006719919 XM_006719920 XM_006719921 XP_005254089 XP_006719979 XP_006719980 XP_006719981 XP_006719982 XP_006719983 XP_006719984	inside exon	inside	58570	inside exon	0	20	22	inside transcription region		66504	59795	0.69	FALSE
449	chr15	78633385	78633563	179		56.44260	10103.226	7976412	7976590	232	3177	1.0790503	0.0000000	0.0000000	0.0000000	4.3162011	NaN	NaN	1.000000e+100	0.0019006	TRUE	0.0846715	TRUE	CRABP1	NM_004378 NP_004369	inside exon	inside	719	inside exon	0	2	4	inside transcription region		7906	7548	0.69	FALSE
450	chr2	237074211	237074398	188		53.73981	10103.084	23176210	23176397	622	860	0.3880319	0.0000000	0.0000000	0.0000000	1.5521277	NaN	NaN	1.000000e+100	0.0019006	TRUE	0.0846715	TRUE	GBX2	NM_001485 NP_001476 XM_005246071 XP_005246128	overlaps 3'	overlaps 3'	2254	inside exon	0	3	3	3'UTR		2345	1612	0.69	FALSE
451	chr2	27171656	27171898	243		41.55858	10098.734	2271117	2271359	64	5028	0.4956790	0.0000000	0.0000000	0.0000000	1.9827160	NaN	NaN	1.000000e+100	0.0019029	TRUE	0.0846715	TRUE	DPYSL5	NM_001253723 NM_001253724 NM_020134 NP_001240652 NP_001240653 NP_064519	inside exon	inside	100364	inside exon	0	13	13	3'UTR		101927	48495	0.69	FALSE
452	chr5	7266287	7266379	93		108.56426	10096.476	411872	411964	14	2832	0.4338710	0.0000000	0.0000000	0.0000000	1.7354839	NaN	NaN	1.000000e+100	0.0019037	TRUE	0.0846715	TRUE	MIR4454	NR_039659	NA	NA	0	NA	NA	NA	1	NA		0	0	0.69	FALSE
453	chr15	77906118	77906236	119		84.84278	10096.291	7908941	7909059	231	2856	0.6848739	0.0000000	0.0000000	0.0000000	2.7394958	NaN	NaN	1.000000e+100	0.0019040	TRUE	0.0846715	TRUE	LINGO1	NM_032808 NP_116197 XM_006720723 XP_006720786	inside exon	inside	82239	inside exon	0	4	4	3'UTR		83106	1844	0.69	FALSE
454	chr17	47129098	47129268	171		58.89830	10071.610	9733884	9734054	231	18864	0.7078947	0.0000000	0.0000000	0.0000000	2.8315789	NaN	NaN	1.000000e+100	0.0019206	TRUE	0.0852042	TRUE	IGF2BP1	NM_001160423 NM_006546 NP_001153895 NP_006537 XM_005256955 XP_005257012	inside exon	inside	54324	inside exon	0	13	13	3'UTR		58733	51698	0.69	FALSE
455	chr8	9760344	9760432	89		113.10754	10066.571	608741	608829	19	2431	0.4786517	0.0000000	0.0000000	0.0000000	1.9146067	NaN	NaN	1.000000e+100	0.0019244	TRUE	0.0852042	TRUE	LINC00599	NR_024281	NA	NA	0	NA	NA	NA	3	NA		0	0	0.69	FALSE
456	chr22	45939281	45939406	126		79.75466	10049.087	5802369	5802494	151	2298	1.5829365	0.1603175	0.2206349	0.3126984	5.6380952	4.607296e-01	9.638403e-01	5.136204e+00	0.0019358	TRUE	0.0854917	TRUE	FBLN1	NM_001996 NM_006485 NM_006486 NM_006487 NP_001987 NP_006476 NP_006477 NP_006478	inside exon	inside	40562	inside exon	0	11	17	inside transcription region		98295	97460	0.69	FALSE
457	chr9	76701613	76701778	166		60.45454	10035.453	4588730	4588895	157	6962	0.4927711	0.0000000	0.0000000	0.0000000	1.9710843	NaN	NaN	1.000000e+100	0.0019452	TRUE	0.0854917	TRUE	RORB	NM_006914 NP_008845	upstream	upstream	410474	NA	NA	NA	10	NA		189865	187641	0.69	FALSE
458	chr21	18941752	18941930	179		56.04554	10032.152	273492	273670	17	3751	0.8162011	0.2055866	0.0379888	0.2670391	2.7541899	-2.436099e+00	3.773049e-01	3.743810e+00	0.0019483	TRUE	0.0854917	TRUE	CXADR	NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338 NP_001193992 NP_001193993 NP_001193994 NP_001193995 NP_001329	inside intron	inside	56528	inside intron	-3823	7	8	inside transcription region		80673	80063	0.69	FALSE
459	chr20	38902161	38902383	223		44.97933	10030.391	4403469	4403691	116	5560	1.7230942	0.0394619	0.0394619	0.0161435	6.7973094	0.000000e+00	-1.289507e+00	7.428360e+00	0.0019493	TRUE	0.0854917	TRUE	MAFB	NM_005461 NP_005452	downstream	downstream	415493	NA	NA	NA	1	NA		3359	971	0.69	FALSE
460	chr11	83108133	83108233	101		99.22782	10022.010	9794343	9794443	291	101	0.8143564	0.1069307	0.0396040	0.0000000	3.1108911	-1.432959e+00	-1.000000e+100	4.862580e+00	0.0019549	TRUE	0.0854917	TRUE	DLG2	NM_001142699 NM_001142700 NM_001142702 NM_001206769 NM_001364 NP_001136171 NP_001136172 NP_001136174 NP_001193698 NP_001355 XM_005273805 XM_005273806 XM_005273807 XM_005273809 XM_005273810 XM_005273811 XM_006718438 XM_006718439 XM_006718440 XP_005273862 XP_005273863 XP_005273864 XP_005273866 XP_005273867 XP_005273868 XP_006718501 XP_006718502 XP_006718503	downstream	downstream	285235	NA	NA	NA	11	NA		227412	173463	0.69	FALSE
461	chr1	82456075	82456254	180		55.66019	10018.835	11404955	11405134	322	1848	0.8138889	0.0000000	0.0000000	0.0000000	3.2555556	NaN	NaN	1.000000e+100	0.0019564	TRUE	0.0854917	TRUE	LPHN2	NM_012302 NP_036434 XM_005270666 XM_005270667 XM_005270668 XM_005270670 XM_005270673 XM_005270674 XM_006710485 XM_006710486 XM_006710487 XM_006710488 XM_006710489 XM_006710490 XM_006710491 XM_006710492 XM_006710493 XM_006710494 XM_006710495 XM_006710496 XM_006710497 XP_005270723 XP_005270724 XP_005270725 XP_005270727 XP_005270730 XP_005270731 XP_006710548 XP_006710549 XP_006710550 XP_006710551 XP_006710552 XP_006710553 XP_006710554 XP_006710555 XP_006710556 XP_006710557 XP_006710558 XP_006710559 XP_006710560	inside exon	inside	40202	inside exon	0	17	17	inside transcription region		42234	40867	0.69	FALSE
462	chr14	22005030	22005130	101		99.07812	10006.891	322723	322823	22	2586	0.5792079	0.0000000	0.0000000	0.0158416	2.3009901	NaN	1.000000e+100	1.000000e+100	0.0019650	TRUE	0.0856447	TRUE	SALL2	NM_005407 NP_005398 XM_005267983 XP_005268040	inside exon	inside	207	inside exon	0	1	4	overlaps 5' UTR		15864	14913	0.70	FALSE
463	chr16	65264400	65264601	202		49.51640	10002.313	8195168	8195369	214	5478	0.8430693	0.0089109	0.0217822	0.0257426	3.3158416	1.289507e+00	1.530515e+00	8.539590e+00	0.0019684	TRUE	0.0856447	TRUE	LINC00922	NM_001101346 NR_027755	NA	NA	0	NA	NA	NA	6	NA		0	0	0.70	FALSE
464	chr9	124558856	124558991	136		73.41917	9985.007	9066783	9066918	316	483	0.8213235	0.0000000	0.1485294	0.0000000	3.1367647	1.000000e+100	NaN	1.000000e+100	0.0019786	TRUE	0.0859038	TRUE	DAB2IP	NM_032552 NM_138709 NP_115941 NP_619723 XM_005251719 XM_005251720 XM_005251721 XM_005251722 XM_005251723 XM_005251724 XM_005251725 XM_006716961 XM_006716962 XP_005251776 XP_005251777 XP_005251778 XP_005251779 XP_005251780 XP_005251781 XP_005251782 XP_006717024 XP_006717025	downstream	downstream	229457	NA	NA	NA	17	NA		218410	216356	0.70	FALSE
465	chr17	42882181	42882372	192		51.93732	9971.965	8249029	8249220	204	7091	0.6260417	0.2072917	0.0000000	0.0000000	2.2968750	-1.000000e+100	-1.000000e+100	3.469938e+00	0.0019877	TRUE	0.0861126	TRUE	GJC1	NM_001080383 NM_005497 NP_001073852 NP_005488 XM_005256920 XM_005256921 XP_005256977 XP_005256978	inside exon	inside	25807	inside exon	0	3	3	inside transcription region		32363	1190	0.70	FALSE
466	chr7	156685703	156685770	68		146.35663	9952.251	16523526	16523593	453	77	12.2485294	39.2941176	6.2617647	2.7764706	0.6617647	-2.649672e+00	-3.822989e+00	-5.891851e+00	0.0020008	TRUE	0.0864959	TRUE	LMBR1	NM_022458 NP_071903 XM_005249555 XM_005249556 XM_005249558 XM_005249559 XP_005249612 XP_005249613 XP_005249615 XP_005249616 XR_428184 XR_428185	inside exon	inside	132	inside exon	0	1	15	5' UTR		212332	208925	0.70	FALSE
467	chr1	62696349	62696450	102		97.38546	9933.317	10234282	10234383	268	5146	0.5524510	0.0000000	0.0000000	0.0000000	2.2098039	NaN	NaN	1.000000e+100	0.0020135	TRUE	0.0868565	TRUE	KANK4	NM_181712 NP_859063	downstream	downstream	32646	NA	NA	NA	4	NA		27259	14885	0.70	FALSE
468	chr2	241653192	241653345	154		64.45807	9926.543	23640111	23640264	634	13166	0.8000000	0.0259740	0.0000000	0.0000000	3.1740260	-1.000000e+100	-1.000000e+100	6.933101e+00	0.0020179	TRUE	0.0868594	TRUE	KIF1A	NM_001244008 NM_004321 NP_001230937 NP_004312 XM_005247022 XM_005247023 XM_005247024 XM_005247026 XM_005247027 XM_005247028 XM_006712601 XM_006712602 XM_006712603 XM_006712604 XM_006712605 XP_005247079 XP_005247080 XP_005247081 XP_005247083 XP_005247084 XP_005247085 XP_006712664 XP_006712665 XP_006712666 XP_006712667 XP_006712668	inside exon	inside	106380	inside exon	0	49	49	3'UTR		106544	80388	0.70	FALSE
469	chr11	3432862	3432998	137		72.27772	9902.048	720472	720608	13	10349	0.8985401	0.0000000	0.0000000	0.0000000	3.5941606	NaN	NaN	1.000000e+100	0.0020323	TRUE	0.0872943	TRUE	LOC650368	NR_024248	NA	NA	0	NA	NA	NA	9	NA		0	0	0.70	FALSE
470	chr2	193000335	193000454	120		82.43569	9892.283	18581135	18581254	499	120	2.8979167	0.0000000	0.0000000	0.1683333	11.4233333	NaN	1.000000e+100	1.000000e+100	0.0020396	TRUE	0.0874215	TRUE	TMEFF2	NM_016192 NP_057276 XM_005246437 XP_005246494	inside intron	inside	59190	inside intron	-43940	4	10	inside transcription region		244897	244213	0.70	FALSE
471	chr1	6306352	6306458	107		92.29174	9875.216	924540	924646	30	1346	0.6000000	0.0000000	0.0000000	0.0000000	2.4000000	NaN	NaN	1.000000e+100	0.0020524	TRUE	0.0875924	TRUE	HES3	NM_001024598 NP_001019769	close to 3'	close to 3'	2100	NA	NA	NA	4	NA		1386	1141	0.71	FALSE
472	chr1	158068293	158068491	199		49.61405	9873.196	20093347	20093545	545	6758	0.4572864	0.1989950	0.0000000	0.0000000	1.6301508	-1.000000e+100	-1.000000e+100	3.034201e+00	0.0020531	TRUE	0.0875924	TRUE	KIRREL	NM_001286349 NM_018240 NP_001273278 NP_060710 XM_005245305 XM_005245306 XM_006711430 XP_005245362 XP_005245363 XP_006711493	downstream	downstream	105230	NA	NA	NA	15	NA		102781	101443	0.71	FALSE
473	chr4	79462972	79463128	157		62.87832	9871.896	5857884	5858040	207	3243	0.6917197	0.0000000	0.1872611	0.2114650	2.3681529	1.000000e+100	1.000000e+100	1.000000e+100	0.0020566	TRUE	0.0875924	TRUE	FRAS1	NM_001166133 NM_020875 NM_025074 NM_032863 NM_206841 NP_001159605 NP_079350 XM_006714314 XM_006714315 XM_006714316 XM_006714317 XP_006714377 XP_006714378 XP_006714379 XP_006714380	inside exon	inside	484248	inside exon	0	74	74	3'UTR		486699	483114	0.71	FALSE
474	chr6	131828039	131828174	136		72.26000	9827.359	12291424	12291559	343	136	2.2977941	0.0000000	0.2617647	0.5411765	8.3882353	1.000000e+100	1.000000e+100	1.000000e+100	0.0020878	TRUE	0.0884195	TRUE	ARG1	NM_000045 NM_001244438 NP_000036 NP_001231367	upstream	upstream	66170	NA	NA	NA	7	NA		11121	10524	0.71	FALSE
475	chr20	38900421	38900550	130		75.49913	9814.887	4402171	4402300	116	5560	0.6069231	0.0000000	0.0000000	0.0000000	2.4276923	NaN	NaN	1.000000e+100	0.0020943	TRUE	0.0884195	TRUE	MAFB	NM_005461 NP_005452	downstream	downstream	417326	NA	NA	NA	1	NA		3359	971	0.71	FALSE
476	chr7	13933064	13933284	221		44.39781	9811.916	1615368	1615588	37	4281	0.8846154	0.4081448	0.1828054	0.0000000	2.9475113	-1.158772e+00	-1.000000e+100	2.852344e+00	0.0020957	TRUE	0.0884195	TRUE	ETV1	NM_001163147 NM_001163148 NM_001163149 NM_001163150 NM_001163151 NM_001163152 NM_004956 NP_001156619 NP_001156620 NP_001156621 NP_001156622 NP_001156623 NP_001156624 NP_004947 XM_005249635 XM_005249636 XP_005249692 XP_005249693	inside exon	inside	97766	inside exon	0	13	13	3'UTR		100194	82539	0.71	FALSE
477	chr4	93365600	93365700	101		97.13011	9810.141	7117134	7117234	250	6141	0.6188119	0.0000000	0.0000000	0.0000000	2.4752475	NaN	NaN	1.000000e+100	0.0020967	TRUE	0.0884195	TRUE	GRID2	NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258	inside intron	inside	140050	inside intron	-139705	1	15	inside transcription region		1468099	1467841	0.71	FALSE
478	chr1	13942400	13942520	121		81.04175	9806.051	2304219	2304339	59	3939	0.6838843	0.3867769	0.0000000	0.0000000	2.3487603	-1.000000e+100	-1.000000e+100	2.602326e+00	0.0020980	TRUE	0.0884195	TRUE	PDPN	NM_001006624 NM_001006625 NM_006474 NM_198389 NP_001006625 NP_001006626 NP_006465 NP_938203 XM_006710295 XP_006710358	inside exon	inside	30433	inside exon	0	6	6	overlaps 3'UTR		32485	8679	0.71	FALSE
479	chr5	141692045	141692145	101		97.02620	9799.646	12325387	12325487	384	14439	0.4400990	0.0000000	0.0000000	0.0000000	1.7603960	NaN	NaN	1.000000e+100	0.0021047	TRUE	0.0885146	TRUE	SPRY4	NM_001127496 NM_030964 NP_001120968 NP_112226 XM_005268518 XM_005268519 XM_006714798 XP_005268575 XP_005268576 XP_006714861	inside exon	inside	12475	inside exon	0	3	3	3'UTR		14628	5556	0.71	FALSE
480	chr16	51173356	51173479	124		78.78012	9768.734	7328509	7328632	178	4772	0.5338710	0.0000000	0.0000000	0.0000000	2.1354839	NaN	NaN	1.000000e+100	0.0021280	TRUE	0.0891384	TRUE	SALL1	NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304	inside exon	inside	11704	inside exon	0	2	3	inside transcription region		14160	4818	0.72	FALSE
481	chr15	65622064	65622202	139		70.27527	9768.262	5965180	5965318	184	8664	0.9291367	0.0071942	0.0000000	0.0000000	3.7093525	-1.000000e+100	-1.000000e+100	9.010108e+00	0.0021283	TRUE	0.0891384	TRUE	IGDCC3	NM_004884 NP_004875	inside exon	inside	26508	inside exon	0	11	12	inside transcription region		26982	6564	0.72	FALSE
482	chr7	83090034	83090139	106		91.81007	9731.868	8279583	8279688	218	5588	0.6688679	0.0000000	0.0000000	0.0000000	2.6754717	NaN	NaN	1.000000e+100	0.0021563	TRUE	0.0901196	TRUE	SEMA3E	NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250	inside intron	inside	188340	inside intron	-5659	4	17	inside transcription region		285257	280956	0.72	FALSE
483	chr14	77598476	77598592	117		82.89532	9698.753	7117113	7117229	221	2474	0.6170940	0.0000000	0.0000000	0.0000000	2.4683761	NaN	NaN	1.000000e+100	0.0021827	TRUE	0.0909085	TRUE	ZDHHC22	NM_174976 NP_777636 XM_006720119 XM_006720120 XP_006720182 XP_006720183	inside exon	inside	9542	inside exon	0	3	3	3'UTR		10521	6055	0.72	FALSE
484	chrX	113836089	113836246	158		61.37717	9697.593	6944417	6944574	300	5470	3.6591772	0.7670886	1.2784810	1.4063291	11.1848101	7.369656e-01	8.744691e-01	3.866004e+00	0.0021842	TRUE	0.0909085	TRUE	HTR2C	NM_000868 NM_001256760 NM_001256761 NP_000859 NP_001243689 NP_001243690	inside intron	inside	17538	inside intron	12027	2	7	5' UTR		326073	180632	0.72	FALSE
485	chr15	65622631	65622735	105		92.03202	9663.362	5965319	5965423	184	8664	0.9038095	0.0000000	0.0000000	0.0000000	3.6152381	NaN	NaN	1.000000e+100	0.0022108	TRUE	0.0918261	TRUE	IGDCC3	NM_004884 NP_004875	inside exon	inside	25975	inside exon	0	10	12	inside transcription region		26982	6564	0.72	FALSE
486	chr8	30242222	30242387	166		58.00262	9628.435	2684413	2684578	80	656	0.7948795	0.0939759	0.1180723	0.1361446	2.8313253	3.293076e-01	5.347767e-01	4.913043e+00	0.0022327	TRUE	0.0925449	TRUE	RBPMS	NM_001008710 NM_001008711 NM_001008712 NM_006867 NP_001008710 NP_001008711 NP_001008712 NP_006858 XM_005273386 XM_005273390 XM_006716277 XM_006716278 XM_006716279 XP_005273443 XP_005273447 XP_006716340 XP_006716341 XP_006716342 XR_428303 XR_428304 XR_428305	inside exon	inside	278	inside exon	0	1	9	5' UTR		187790	173857	0.72	FALSE
487	chr4	93542615	93542715	101		95.16360	9611.524	7119186	7119286	253	1605	0.5212871	0.0000000	0.0000000	0.0000000	2.0851485	NaN	NaN	1.000000e+100	0.0022442	TRUE	0.0928313	TRUE	GRID2	NM_001286838 NM_001510 NP_001273767 NP_001501 XM_006714195 XP_006714258	inside intron	inside	317065	inside intron	-31178	2	15	inside transcription region		1468099	1467841	0.72	FALSE
488	chr13	56156848	56157013	166		57.85711	9604.280	3927430	3927595	121	13379	0.8132530	0.0000000	0.0000000	0.0000000	3.2530120	NaN	NaN	1.000000e+100	0.0022498	TRUE	0.0928754	TRUE	MIR5007	NR_049804	NA	NA	0	NA	NA	NA	1	NA		0	0	0.73	FALSE
489	chr4	180090213	180090347	135		71.00091	9585.122	12309507	12309641	468	3689	1.2514815	0.1007407	0.1925926	0.0000000	4.7125926	9.349050e-01	-1.000000e+100	5.547802e+00	0.0022646	TRUE	0.0931165	TRUE	LINC01098	NM_001085490 NR_028342	NA	NA	0	NA	NA	NA	6	NA		0	0	0.73	FALSE
490	chr22	31531000	31531100	101		94.89712	9584.609	2713910	2714010	72	5042	0.5054455	0.0000000	0.0000000	0.0000000	2.0217822	NaN	NaN	1.000000e+100	0.0022649	TRUE	0.0931165	TRUE	PLA2G3	NM_015715 NP_056530	inside exon	inside	5369	inside exon	0	7	7	3'UTR		5676	4631	0.73	FALSE
491	chr1	16112792	16113003	212		45.14585	9570.920	2508882	2509093	69	1865	0.8985849	0.4745283	0.1943396	0.2113208	2.7141509	-1.287914e+00	-1.167060e+00	2.515935e+00	0.0022771	TRUE	0.0934261	TRUE	FBLIM1	NM_001024215 NM_001024216 NM_017556 NP_001019386 NP_001019387 NP_060026 XM_005245900 XM_005245901 XM_005245902 XM_005245903 XM_005245904 XM_005245908 XM_005245909 XM_005245910 XM_005245911 XM_006710704 XM_006710705 XP_005245957 XP_005245958 XP_005245959 XP_005245960 XP_005245961 XP_005245965 XP_005245966 XP_005245967 XP_005245968 XP_006710767 XP_006710768	inside exon	inside	21333	inside exon	0	5	5	3'UTR		21625	19677	0.73	FALSE
492	chrX	136653429	136653529	101		94.48578	9543.064	8316826	8316926	368	1802	0.5049505	0.0000000	0.0000000	0.0000000	2.0198020	NaN	NaN	1.000000e+100	0.0022998	TRUE	0.0940143	TRUE	ZIC3	NM_003413 NP_003404	inside exon	inside	5083	inside exon	0	3	3	3'UTR		5913	3378	0.73	FALSE
493	chr16	51170377	51170627	251		37.97442	9531.580	7327453	7327703	178	4772	0.7262948	0.0000000	0.0000000	0.0000000	2.9051793	NaN	NaN	1.000000e+100	0.0023100	TRUE	0.0940143	TRUE	SALL1	NM_001127892 NM_002968 NP_001121364 NP_002959 XM_006721241 XP_006721304	inside exon	inside	14556	inside exon	0	3	3	3'UTR		15297	13764	0.73	FALSE
494	chr7	136912591	136912822	232		41.06983	9528.201	13939736	13939967	384	720	1.2452586	0.1379310	0.2137931	0.0000000	4.6293103	6.322682e-01	-1.000000e+100	5.068778e+00	0.0023128	TRUE	0.0940143	TRUE	PTN	NM_002825 NP_002816 XM_005250515 XM_005250516 XP_005250572 XP_005250573	inside exon	inside	115724	inside exon	0	5	5	overlaps 3'UTR		116454	26953	0.73	FALSE
495	chr8	15517016	15517156	141		67.53429	9522.335	1075373	1075513	31	2790	1.1358156	0.7716312	0.0000000	0.0000000	3.7716312	-1.000000e+100	-1.000000e+100	2.289205e+00	0.0023162	TRUE	0.0940143	TRUE	TUSC3	NM_006765 NM_178234 NP_006756 NP_839952 XM_005273646 XM_005273647 XM_005273648 XP_005273703 XP_005273704 XP_005273705	inside exon	inside	119420	inside exon	0	4	10	inside transcription region		226562	223787	0.73	FALSE
496	chrX	121375487	121375583	97		98.15380	9520.918	7508209	7508305	321	3521	0.4778351	0.0000000	0.0000000	0.0000000	1.9113402	NaN	NaN	1.000000e+100	0.0023177	TRUE	0.0940143	TRUE	GRIA3	NM_000828 NM_001256743 NM_007325 NM_181894 NP_000819 NP_001243672 NP_015564	upstream	upstream	942513	NA	NA	NA	5	NA		20437	19882	0.73	FALSE
497	chr2	67563150	67563343	194		49.06549	9518.706	7343573	7343766	170	8050	1.1793814	0.0546392	0.2061856	0.0000000	4.4567010	1.915936e+00	-1.000000e+100	6.349897e+00	0.0023194	TRUE	0.0940143	TRUE	ETAA1	NM_019002 NP_061875 XM_005264374 XM_005264375 XM_005264376 XM_005264377 XM_005264378 XP_005264431 XP_005264432 XP_005264433 XP_005264434 XP_005264435	upstream	upstream	61099	NA	NA	NA	6	NA		13091	12589	0.73	FALSE
498	chr11	3416872	3416972	101		93.69364	9463.058	718832	718932	12	7326	0.5247525	0.0000000	0.0000000	0.0000000	2.0990099	NaN	NaN	1.000000e+100	0.0023608	TRUE	0.0954988	TRUE	LOC650368	NR_024248	NA	NA	0	NA	NA	NA	11	NA		0	0	0.74	FALSE
499	chr5	146798010	146798194	185		50.96232	9428.029	12809684	12809868	396	5986	1.2129730	0.3340541	0.2951351	0.0000000	4.2227027	-1.787059e-01	-1.000000e+100	3.660013e+00	0.0023882	TRUE	0.0964141	TRUE	DPYSL3	NM_001197294 NM_001387 NP_001184223 NP_001378	inside exon	inside	91425	inside exon	0	3	14	inside transcription region		119248	115823	0.74	FALSE
500	chr7	83094486	83094655	170		55.38853	9416.051	8283041	8283210	218	5588	2.2797059	0.0000000	0.0000000	0.0000000	9.1188235	NaN	NaN	1.000000e+100	0.0023962	TRUE	0.0964694	TRUE	SEMA3E	NM_001178129 NM_012431 NP_001171600 NP_036563 XM_006716187 XP_006716250	inside intron	inside	183824	inside intron	-1143	4	17	inside transcription region		285257	280956	0.74	FALSE